FastQCFastQC Report
Sun 21 May 2023
EGAF00007838098

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007838098
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences43933
Sequences flagged as poor quality0
Sequence length250
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTCCGCACGTGTGTCAGCCGCCGCGGTAATACGTAGGGTGCGAGCGTTA13483.06830856076298No Hit
TCTCCGCACGTGTGTCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTA12422.827032071563517No Hit
TCTCCGCACGTGTGTCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTG9582.1805931759725037No Hit
TCTCCGCACGTGTGTCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTG9452.1510026631461545No Hit
TCTCCGCACGTGTGTCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTG9412.141897889968816No Hit
TCTCCGCACGTGTGTCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTG8982.0440215783124303No Hit
TCTCCGCACGTGTGCCAGCCGCCGCGGTAATACGTAGGGTGCGAGCGTTA7791.773154576286618No Hit
TCTCCGCACGTGTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTA7741.7617736098149455No Hit
TCTCCGCACGTGTGTCAGCCGCCGCGGTAATACGGAAGGTCCAGGCGTTA6621.5068399608494754No Hit
TACCGGTCGCCGGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCT6531.4863542212004643No Hit
TACCGGTCGCCGGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCT6121.3930302961327476No Hit
TCTCCGCACGTGTGTCAGCAGCCGCGGTAATACGGAAGGTCCAGGCGTTA5801.3201921107140417No Hit
TCTCCGCACGTGTGTCAGCCGCCGCGGTAATACGGAGGGTGCGAGCGTTA5781.3156397241253728No Hit
TCTCCGCACGTGTGTCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTA5751.308811144242369No Hit
TCTCCGCACGTGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTG5531.258734891767009No Hit
TCTCCGCACGTGTGCCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTG5471.2450777320010014No Hit
TCTCCGCACGTGTGCCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTG5451.2405253454123324No Hit
TACCGGTCGCCGGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCT5161.1745157398766304No Hit
TCTCCGCACGTGTGCCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTG5071.1540300002276194No Hit
TACCGGTCGCCGGACTACGCGGGTTTCTAATCCTGTTTGCTACCCACGCT5041.1472014203446157No Hit
TACCGGTCGCCGGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCT4931.1221632941069355No Hit
TACCGGTCGCCGGACTACGGGGGTTTCTAATCCTGTTTGCTACCCACGCT4891.1130585209295973No Hit
TACCGGTCGCCGGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCT4601.0470489153938953No Hit
TACCGGTCGCCGGACTACTGGGGTTTCTAATCCTGTTTGCTACCCACGCT4260.9696583433865205No Hit
TCTCCGCACGTGTGCCAGCAGCCGCGGTAATACGGAAGGTCCAGGCGTTA4200.9560011836205131No Hit
TACCGGTCGCCGGACTACTCGGGTTTCTAATCCTGTTTGCTACCCACGCT4130.9400678305601712No Hit
TACCGGTCGCCGGACTACGAGGGTTTCTAATCCTGTTTGCTACCCACGCT3960.9013725445564837No Hit
TCTCCGCACGTGTGCCAGCCGCCGCGGTAATACGGAAGGTCCAGGCGTTA3890.8854391914961419No Hit
TCTCCGCACGTGTGTCAGCCGCCGCGGTAATACGGGGGGTGCGAGCGTTA3690.8399153256094508No Hit
TACCGGTCGCCGGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCT3570.812601006077436No Hit
TCTCCGCACGTGTGTCAGCAGCCGCGGTAATACGGGGGGTGCGAGCGTTA3500.7966676530170943No Hit
TACCGGTCGCCGGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCT3200.7283818541870576No Hit
TACCGGTCGCCGGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCT3170.7215532743040539No Hit
TCTCCGCACGTGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTA3160.7192770810097193No Hit
TACCGGTCGCCGGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCT3090.7033437279493775No Hit
TCTCCGCACGTGTGCCAGCCGCCGCGGTAATACGGAGGGTGCGAGCGTTA3070.6987913413607083No Hit
TACCGGTCGCCGGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCT2890.6578198620626864No Hit
TACCGGTCGCCGGACTACAGGGGTTTCTAATCCTGTTTGCTACCCACGCT2800.6373341224136754No Hit
TACCGGTCGCCGGACTACTAGGGTTTCTAATCCTGTTTGCTACCCACGCT2790.6350579291193408No Hit
TACCGGTCGCCGGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCT2670.6077436095873262No Hit
TACCGGTCGCCGGACTACGGGGGTATCTAATCCTGTTTGCTACCCACGCT2650.603191222998657No Hit
TACCGGTCGCCGGACTACCGGGGTTTCTAATCCTGTTTGCTACCCACGCT2570.5849816766439806No Hit
TACCGGTCGCCGGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCT2570.5849816766439806No Hit
TACCGGTCGCCGGACTACACGGGTTTCTAATCCTGTTTGCTACCCACGCT2480.5644959369949697No Hit
TCTCCGCACGTGTGTCAGCAGCCGCGGTAATACGTAGGGCGCGAGCGTTG2470.562219743700635No Hit
TCTCCGCACGTGTGTCAGCCGCCGCGGTAATACGTATGTCACAAGCGTTA2450.5576673571119659No Hit
TACCGGTCGCCGGACTACGCGGGTATCTAATCCTGTTTGCTACCCACGCT2440.5553911638176314No Hit
TACCGGTCGCCGGACTACCCGGGTTTCTAATCCTGTTTGCTACCCACGCT2380.5417340040516241No Hit
TCTCCGCACGTGTGTCAGCCGCCGCGGTAATACGGAAGGTCCGGGCGTTA2310.5258006509912821No Hit
TCTCCGCACGTGTGTCAGCAGCCGCGGTAATACGTATGTCACAAGCGTTA2280.5189720711082785No Hit
TCTCCGCACGTGTGTCAGCAGCCGCGGTAATACGGAAGGTCCGGGCGTTA2240.5098672979309403No Hit
TCTCCGCACGTGTGCCAGCAGCCGCGGTAATACGGGGGGTGCGAGCGTTA2100.47800059181025656No Hit
TCTCCGCACGTGTGTCAGCCGCCGCGGTAATACGTAGGGCGCGAGCGTTG2080.47344820522158737No Hit
TCTCCGCACGTGTGTCAGCCGCCGCGGTAATACGGAGGATGCGAGCGTTA2080.47344820522158737No Hit
TCTCCGCACGTGTGTCAGCAGCCGCGGTAATACGGAGGATGCGAGCGTTA2040.4643434320442492No Hit
TACCGGTCGCCGGACTACGGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT1880.4279243393348963No Hit
TACCGGTCGCCGGACTACGAGGGTATCTAATCCTGTTTGCTACCCACGCT1870.4256481460405618No Hit
TACCGGTCGCCGGACTACTGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT1850.42109575945189265No Hit
TACCGGTCGCCGGACTACCAGGGTTTCTAATCCTGTTTGCTACCCACGCT1790.4074385996858853No Hit
TACCGGTCGCCGGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCT1790.4074385996858853No Hit
TACCGGTCGCCGGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCT1780.40516240639155077No Hit
TACCGGTCGCCGGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCT1770.40288621309721623No Hit
TACCGGTCGCCGGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCT1760.4006100198028817No Hit
TCTCCGCACGTGTGCCAGCCGCCGCGGTAATACGGGGGGTGCGAGCGTTA1700.3869528600368743No Hit
TACCGGTCGCCGGACTACGCGGGTTTCTAATCCCGTTCGCTCCCCTGGCT1690.38467666674253975No Hit
TACCGGTCGCCGGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCT1650.37557189356520154No Hit
TACCGGTCGCCGGACTACTCGGGTTTCTAATCCCGTTCGCTCCCCTGGCT1640.373295700270867No Hit
TACCGGTCGCCGGACTACAAGGGTTTCTAATCCTGTTTGCTACCCACGCT1610.36646712038786333No Hit
TACCGGTCGCCGGACTACTCGGGTATCTAATCCTGTTTGCTACCCACGCT1590.3619147337991942No Hit
TCTCCGCACGTGTGTCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTA1570.3573623472105251No Hit
TCTCCGCACGTGTGCCAGCAGCCGCGGTAATACGGAAGGTCCGGGCGTTA1490.3391528008558487No Hit
TCTCCGCACGTGTGTCAGCCGCCGCGGTAATACGTAGGGGGCAAGCGTTA1440.3277718343841759No Hit
TCTCCGCACGTGTGCCAGCAGCCGCGGTAATACGTATGTCACAAGCGTTA1430.32549564108984136No Hit
TACCGGTCGCCGGACTACGAGGGTTTCTAATCCCGTTCGCTCCCCTGGCT1430.32549564108984136No Hit
TCTCCGCACGTGTGCCAGCCGCCGCGGTAATACGTAGGGCGCGAGCGTTG1400.3186670612068377No Hit
TCTCCGCACGTGTGCCAGCAGCCGCGGTAATACGGAGGATGCGAGCGTTA1380.3141146746181686No Hit
TCTCCGCACGTGTGCCAGCCGCCGCGGTAATACGTATGTCACAAGCGTTA1370.311838481323834No Hit
TACCGGTCGCCGGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCT1340.30500990144083034No Hit
TACCGGTCGCCGGACTACTGGGGTATCTAATCCTGTTTGCTACCCACGCT1320.3004575148521612No Hit
TCTCCGCACGTGTGCCAGCAGCCGCGGTAATACGTAGGGCGCGAGCGTTG1310.2981813215578267No Hit
TCTCCGCACGTGTGCCAGCCGCCGCGGTAATACGGAGGATGCGAGCGTTA1220.2776955819088157No Hit
TACCGGTCGCCGGACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCT1160.26403842214280837No Hit
TCTCCGCACGTGTGCCAGCCGCCGCGGTAATACGGAAGGTCCGGGCGTTA1150.26176222884847383No Hit
TACCGGTCGCCGGACTACGCGGGTTTCTAATCCTGTTTGATACCCGCACC1140.25948603555413924No Hit
TCTCCGCACGTGTGTCAGCCGCCGCGGTAATACGGAGGGTGCAAGCGTTA1130.2572098422598047No Hit
TACCGGTCGCCGGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCT1120.25493364896547016No Hit
TCTCCGCACGTGTGTCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTA1120.25493364896547016No Hit
TACCGGTCGCCGGACTACGGGGGTTTCTAATCCTGTTCGATACCCGCACC1120.25493364896547016No Hit
TACCGGTCGCCGGACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCT1100.25038126237680103No Hit
TACCGGTCGCCGGACTACCGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT1100.25038126237680103No Hit
TACCGGTCGCCGGACTACGGGGGTTTCTAATCCTGTTTGATACCCGCACC1090.24810506908246646No Hit
TACCGGTCGCCGGACTACTGGGGTTTCTAATCCTGTTCGATACCCGCACC1090.24810506908246646No Hit
TACCGGTCGCCGGACTACAGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT1090.24810506908246646No Hit
TACCGGTCGCCGGACTACGCGGGTTTCTAATCCTGTTCGATACCCGCACC1080.24582887578813192No Hit
TACCGGTCGCCGGACTACTAGGGTATCTAATCCTGTTTGCTACCCACGCT1080.24582887578813192No Hit
TACCGGTCGCCGGACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCT1070.24355268249379738No Hit
TCTCCGCACGTGTGCCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTA1050.23900029590512828No Hit
TACCGGTCGCCGGACTACACGGGTATCTAATCCTGTTTGCTACCCACGCT1020.2321717160221246No Hit
TCTCCGCACGTGTGTCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTA1020.2321717160221246No Hit
TACCGGTCGCCGGACTACTAGGGTTTCTAATCCCGTTCGCTCCCCTGGCT1010.22989552272779007No Hit
TACCGGTCGCCGGACTACTCGGGTTTCTAATCCTGTTTGATACCCGCACC1010.22989552272779007No Hit
TACCGGTCGCCGGACTACTCGGGTTTCTAATCCTGTTCGATACCCGCACC1010.22989552272779007No Hit
TACCGGTCGCCGGACTACGAGGGTTTCTAATCCTGTTCGATACCCGCACC1000.22761932943345548No Hit
TACCGGTCGCCGGACTACTGGGGTTTCTAATCCTGTTTGATACCCGCACC970.22079074955045183No Hit
TACCGGTCGCCGGACTACAGGGGTATCTAATCCTGTTTGCTACCCACGCT960.2185145562561173No Hit
TACCGGTCGCCGGACTACGGGGGTATCTAATCCCGTTCGCTCCCCTGGCT960.2185145562561173No Hit
TACCGGTCGCCGGACTACCGGGGTATCTAATCCTGTTTGCTACCCACGCT910.20713358978444452No Hit
TCTCCGCACGTGTGTCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTA900.20485739649010992No Hit
TCTCCGCACGTGTGCCAGCCGCCGCGGTAATACGTAGGGGGCAAGCGTTA890.20258120319577538No Hit
TACCGGTCGCCGGACTACAGGGGTTTCTAATCCTGTTTGATACCCGCACC890.20258120319577538No Hit
TACCGGTCGCCGGACTACGAGGGTTTCTAATCCTGTTTGATACCCGCACC870.19802881660710628No Hit
TACCGGTCGCCGGACTACACGGGTTTCTAATCCCGTTCGCTCCCCTGGCT860.1957526233127717No Hit
TACCGGTCGCCGGACTACTAGGGTTTCTAATCCTGTTCGATACCCGCACC820.1866478501354335No Hit
TCTCCGCACGTGTGTCAGCAGCCGCGGTAATACGGAAGGTTCGGGCGTTA750.17071449707509162No Hit
TACCGGTCGCCGGACTACCCGGGTTTCTAATCCTGTTCGATACCCGCACC750.17071449707509162No Hit
TACCGGTCGCCGGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCT750.17071449707509162No Hit
TACCGGTCGCCGGACTACCCGGGTATCTAATCCTGTTTGCTACCCACGCT740.16843830378075708No Hit
TACCGGTCGCCGGACTACCGGGGTTTCTAATCCTGTTCGATACCCGCACC730.1661621104864225No Hit
TACCGGTCGCCGGACTACACGGGTTTCTAATCCTGTTCGATACCCGCACC730.1661621104864225No Hit
TACCGGTCGCCGGACTACCCGGGTTTCTAATCCCGTTCGCTCCCCTGGCT720.16388591719208795No Hit
TACCGGTCGCCGGACTACTGGGGTATCTAATCCCGTTCGCTCCCCTGGCT720.16388591719208795No Hit
TCTCCGCACGTGTGTCAGCCGCCGCGGTAATACAGAGGGTGCGAGCGTTA720.16388591719208795No Hit
TACCGGTCGCCGGACTACCAGGGTTTCTAATCCCGTTCGCTCCCCTGGCT720.16388591719208795No Hit
TACCGGTCGCCGGACTACCGGGGTTTCTAATCCTGTTTGATACCCGCACC700.15933353060341884No Hit
TACCGGTCGCCGGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCT690.1570573373090843No Hit
TCTCCGCACGTGTGTCAGCAGCCGCGGTAATACGTATGTCACGAGCGTTA680.15478114401474974No Hit
TCTCCGCACGTGTGTCAGCCGCCGCGGTAATACGTATGTCGCGAGCGTTA680.15478114401474974No Hit
TCTCCGCACGTGTGTCAGCAGCCGCGGTAATACAGAGGGTGCGAGCGTTA670.15250495072041517No Hit
TCTCCGCACGTGTGTCAGCAGCCGCGGTAATACGTATGTCGCGAGCGTTA670.15250495072041517No Hit
TACCGGTCGCCGGACTACCAGGGTATCTAATCCTGTTTGCTACCCACGCT650.14795256413174607No Hit
TACCGGTCGCCGGACTACGCGGGTATCTAATCCCGTTCGCTCCCCTGGCT650.14795256413174607No Hit
TCTCCGCACGTGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTA640.1456763708374115No Hit
TACCGGTCGCCGGACTACAAGGGTATCTAATCCTGTTTGCTACCCACGCT640.1456763708374115No Hit
TCTCCGCACGTGTGCCAGCCGCCGCGGTAATACGGAGGGTGCAAGCGTTA640.1456763708374115No Hit
TACCGGTCGCCGGACTACAAGGGTTTCTAATCCCGTTCGCTCCCCTGGCT630.14340017754307696No Hit
TACCGGTCGCCGGACTACGCGGGTTTCTAATCCTGTTCGCTCCCCACGCT620.14112398424874242No Hit
TACCGGTCGCCGGACTACGGGGGTTTCTAATCCTGTTCGCTCCCCACGCT590.13429540436573872No Hit
TACCGGTCGCCGGACTACAGGGGTTTCTAATCCTGTTCGATACCCGCACC590.13429540436573872No Hit
TACCGGTCGCCGGACTACGAGGGTATCTAATCCCGTTCGCTCCCCTGGCT570.12974301777706962No Hit
TCTCCGCACGTGTGCCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTA570.12974301777706962No Hit
TACCGGTCGCCGGACTACTAGGGTTTCTAATCCTGTTTGATACCCGCACC570.12974301777706962No Hit
TACCGGTCGCCGGACTACACGGGTTTCTAATCCTGTTTGATACCCGCACC560.12746682448273508No Hit
TCTCCGCACGTGTGCCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTA560.12746682448273508No Hit
TACCGGTCGCCGGACTACTCGGGTATCTAATCCCGTTCGCTCCCCTGGCT550.12519063118840051No Hit
TCTCCGCACGTGTGTCAGCCGCCGCGGTAATACGTATGTCACGAGCGTTA530.12063824459973141No Hit
TACCGGTCGCCGGACTACGAGGGTATCTAATCCTGTTTGATACCCGCACC530.12063824459973141No Hit
TACCGGTCGCCGGACTACGGGGGTATCTAATCCTGTTCGATACCCGCACC520.11836205130539684No Hit
TACCGGTCGCCGGACTACAAGGGTTTCTAATCCTGTTCGATACCCGCACC520.11836205130539684No Hit
TCTCCGCACGTGTGTCAGCCGCCGCGGTAATACGGAAGGTTCGGGCGTTA520.11836205130539684No Hit
TACCGGTCGCCGGACTACCCGGGTTTCTAATCCTGTTTGATACCCGCACC510.1160858580110623No Hit
TACCGGTCGCCGGACTACTCGGGTTTCTAATCCTGTTTGATACCCACGCT500.11380966471672774No Hit
TCTCCGCACGTGTGCCAGCCGCCGCGGTAATACGGAAGGTTCGGGCGTTA500.11380966471672774No Hit
TACCGGTCGCCGGACTACTCGGGTATCTAATCCTGTTTGATACCCGCACC490.11153347142239319No Hit
TCTCCGCACGTGTGCCAGCAGCCGCGGTAATACAGAGGGTGCGAGCGTTA490.11153347142239319No Hit
TACCGGTCGCCGGACTACGCGGGTATCTAATCCTGTTTGATACCCGCACC490.11153347142239319No Hit
TCTCCGCACGTGTGTCAGCAGCCGCGGTAATACGAAGGGTGCAAGCGTTA480.10925727812805865No Hit
TACCGGTCGCCGGACTACTGGGGTTTCTAATCCTGTTCGCTCCCCACGCT480.10925727812805865No Hit
TCTCCGCACGTGTGCCAGCAGCCGCGGTAATACGTATGTCGCGAGCGTTA470.10698108483372408No Hit
TACCGGTCGCCGGACTACTCGGGTTTCTAATCCTGTTCGCTCCCCATGCT460.10470489153938953No Hit
TACCGGTCGCCGGACTACACGGGTATCTAATCCCGTTCGCTCCCCTGGCT460.10470489153938953No Hit
TCTCCGCACGTGTGTCAGCAGCCGCGGTAATACGGAGGATACGAGCGTTA450.10242869824505496No Hit
TACCGGTCGCCGGACTACGGGGGTTTCTAATCCTGTTTGATACCCACGCT450.10242869824505496No Hit
TACCGGTCGCCGGACTACGGGGGTTTCTAATCCTGTTCGCTCCCCATGCT450.10242869824505496No Hit
TACCGGTCGCCGGACTACCGGGGTATCTAATCCTGTTTGATACCCGCACC450.10242869824505496No Hit
TCTCCGCACGTGTGTCAGCAGCCGCGGTAATACGTAGGTGGCGAGCGTTA440.10015250495072042No Hit
TCTCCGCACGTGTGTCAGCCGCCGCGGTAATACGGAGGATACGAGCGTTA440.10015250495072042No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)