FastQCFastQC Report
Sun 21 May 2023
EGAF00007838204

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007838204
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences45602
Sequences flagged as poor quality0
Sequence length250
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATACACCACGTGTGTCAGCAGCCGCGGTAATACGTAGGGCGCGAGCGTTG12272.6906714617779923No Hit
ATCCTACATCCGGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCT10532.309109249594316No Hit
ATACACCACGTGTGCCAGCAGCCGCGGTAATACGTAGGGCGCGAGCGTTG9702.1270996886101488No Hit
ATACACCACGTGTGTCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTA9262.030612692425771No Hit
ATCCTACATCCGGACTACGCGGGTTTCTAATCCTGTTTGCTACCCACGCT8161.789395201964826No Hit
ATACACCACGTGTGTCAGCAGCCGCGGTAATACGGAAGGTCCGGGCGTTA7641.6753651155651066No Hit
ATACACCACGTGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTA7351.6117714135344943No Hit
ATACACCACGTGTGTCAGCCGCCGCGGTAATACGTAGGGCGCGAGCGTTG7261.592035437042235No Hit
ATCCTACATCCGGACTACGCGGGTTTCTAATCCTGTTCGATACCCGCACC7101.5569492566115521No Hit
ATACACCACGTGTGTCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTG6941.5218630761808694No Hit
ATCCTACATCCGGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCT6851.50212709968861No Hit
ATCCTACATCCGGACTACGCGGGTTTCTAATCCTGTTCGCTCCCCATGCT6851.50212709968861No Hit
ATACACCACGTGTGTCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTA6771.4845840094732687No Hit
ATACACCACGTGTGCCAGCAGCCGCGGTAATACGGAAGGTCCGGGCGTTA6421.40783298978115No Hit
ATACACCACGTGTGTCAGCAGCCGCGGTAATACGGAAGGTCCAGGCGTTA6321.3859041270119732No Hit
ATACACCACGTGTGCCAGCCGCCGCGGTAATACGTAGGGCGCGAGCGTTG5941.3025744484891013No Hit
ATACACCACGTGTGCCAGCAGCCGCGGTAATACGGAAGGTCCAGGCGTTA5631.2345949739046533No Hit
ATACACCACGTGTGTCAGCCGCCGCGGTAATACGGAGGGTGCGAGCGTTA5631.2345949739046533No Hit
ATACACCACGTGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTG5501.2060874523047236No Hit
ATCCTACATCCGGACTACGGGGGTTTCTAATCCTGTTTGCTACCCACGCT5361.175387044427876No Hit
ATACACCACGTGTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTA5201.140300863997193No Hit
ATACACCACGTGTGTCAGCCGCCGCGGTAATACGGAAGGTCCGGGCGTTA4691.0284636638743916No Hit
ATCCTACATCCGGACTACGGGGGTTTCTAATCCTGTTCGATACCCGCACC4550.9977632559975439No Hit
ATCCTACATCCGGACTACGGGGGTTTCTAATCCTGTTCGCTCCCCATGCT4260.9341695539669314No Hit
ATACACCACGTGTGCCAGCCGCCGCGGTAATACGGAGGGTGCGAGCGTTA4140.9078549186439191No Hit
ATACACCACGTGTGTCAGCCGCCGCGGTAATACGTAGGGTGCGAGCGTTA4060.8903118284285777No Hit
ATACACCACGTGTGTCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTG4020.881540283320907No Hit
ATACACCACGTGTGTCAGCCGCCGCGGTAATACGGAAGGTCCAGGCGTTA4020.881540283320907No Hit
ATACACCACGTGTGCCAGCCGCCGCGGTAATACGGAAGGTCCGGGCGTTA3950.8661900793824833No Hit
ATACACCACGTGTGTCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTG3870.8486469891671418No Hit
ATCCTACATCCGGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCT3720.8157536950133767No Hit
ATACACCACGTGTGTCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA3660.8025963773518705No Hit
ATCCTACATCCGGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCT3480.7631244243673523No Hit
ATCCTACATCCGGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCT3350.7346169027674224No Hit
ATACACCACGTGTGCCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTG3280.7192666988289987No Hit
ATACACCACGTGTGCCAGCCGCCGCGGTAATACGTAGGGTGCGAGCGTTA3240.710495153721328No Hit
ATCCTACATCCGGACTACTCGGGTTTCTAATCCTGTTTGCTACCCACGCT3240.710495153721328No Hit
ATACACCACGTGTGCCAGCCGCCGCGGTAATACGGAAGGTCCAGGCGTTA3080.6754089732906451No Hit
ATACACCACGTGTGCCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTG2950.6469014516907153No Hit
ATCCTACATCCGGACTACGCGGGTATCTAATCCTGTTTGCTACCCACGCT2900.635937020306127No Hit
ATCCTACATCCGGACTACGAGGGTTTCTAATCCTGTTTGCTACCCACGCT2850.6249725889215385No Hit
ATACACCACGTGTGTCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTA2720.5964650673216088No Hit
ATACACCACGTGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA2690.5898864084908557No Hit
ATCCTACATCCGGACTACGAGGGTTTCTAATCCTGTTCGATACCCGCACC2690.5898864084908557No Hit
ATCCTACATCCGGACTACTCGGGTTTCTAATCCTGTTCGATACCCGCACC2600.5701504319985965No Hit
ATCCTACATCCGGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCT2530.5548002280601728No Hit
ATCCTACATCCGGACTACTCGGGTTTCTAATCCTGTTCGCTCCCCATGCT2470.5416429103986666No Hit
ATCCTACATCCGGACTACGCGGGTTTCTAATCCCGTTCGCTCCCCTGGCT2460.539450024121749No Hit
ATACACCACGTGTGCCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTA2400.526292706460243No Hit
ATACACCACGTGTGTCAGCAGCCGCGGTAATACGGAAGGTTCGGGCGTTA2350.5153282750756546No Hit
ATCCTACATCCGGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCT2300.5043638436910661No Hit
ATACACCACGTGTGTCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTG2290.5021709574141485No Hit
ATCCTACATCCGGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCT2270.49778518486031315No Hit
ATCCTACATCCGGACTACGCGGGTATCTAATCCTGTTCGCTCCCCATGCT2270.49778518486031315No Hit
ATACACCACGTGTGTCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTA2140.46927766326038334No Hit
ATCCTACATCCGGACTACCCGGGTTTCTAATCCTGTTTGCTACCCACGCT2120.4648918907065479No Hit
ATCCTACATCCGGACTACGCGGGTATCTAATCCTGTTCGATACCCGCACC2090.4583132318757949No Hit
ATCCTACATCCGGACTACGGGGGTATCTAATCCTGTTTGCTACCCACGCT2040.4473488004912065No Hit
ATCCTACATCCGGACTACGAGGGTTTCTAATCCTGTTCGCTCCCCATGCT2020.4429630279373712No Hit
ATACACCACGTGTGTCAGCAGCCGCGGTAATACGGAGGATGCGAGCGTTA1980.43419148282970044No Hit
ATCCTACATCCGGACTACCCGGGTTTCTAATCCTGTTCGATACCCGCACC1960.42980571027586506No Hit
ATCCTACATCCGGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCT1930.423227051445112No Hit
ATACACCACGTGTGCCAGCAGCCGCGGTAATACGGAAGGTTCGGGCGTTA1920.42103416516819436No Hit
ATACACCACGTGTGTCAGCCGCCGCGGTAATACGTAGGGTGCAAGCGTTA1910.41884127889127665No Hit
ATCCTACATCCGGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCT1890.4144555063374414No Hit
ATCCTACATCCGGACTACGCGGGTTTCTAATCCTGTTTGATACCCGCACC1850.40568396122977063No Hit
ATCCTACATCCGGACTACACGGGTTTCTAATCCTGTTTGCTACCCACGCT1810.39691241612209993No Hit
ATACACCACGTGTGCCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTA1810.39691241612209993No Hit
ATCCTACATCCGGACTACTGGGGTTTCTAATCCTGTTTGCTACCCACGCT1730.3793693259067585No Hit
ATACACCACGTGTGTCAGCAGCCGCGGTAATACGTATGTCACAAGCGTTA1720.3771764396298408No Hit
ATCCTACATCCGGACTACGCGGGTTTCTAATCCTGTTCGCTCCCCACGCT1690.37059778079908773No Hit
ATACACCACGTGTGCCAGCCGCCGCGGTAATACGTAGGGTGCAAGCGTTA1680.36840489452217007No Hit
ATACACCACGTGTGTCAGCCGCCGCGGTAATACGTAGGGGGCAAGCGTTA1650.36182623569141703No Hit
ATCCTACATCCGGACTACGGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT1610.3530546905837463No Hit
ATCCTACATCCGGACTACCCGGGTTTCTAATCCTGTTCGCTCCCCATGCT1560.3420902591991579No Hit
ATCCTACATCCGGACTACGGGGGTATCTAATCCTGTTCGATACCCGCACC1550.33989737292224026No Hit
ATCCTACATCCGGACTACTGGGGTTTCTAATCCTGTTCGATACCCGCACC1540.33770448664532254No Hit
ATCCTACATCCGGACTACGGGGGTTTCTAATCCTGTTTGATACCCGCACC1540.33770448664532254No Hit
ATACACCACGTGTGCCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTG1530.33551160036840494No Hit
ATACACCACGTGTGCCAGCAGCCGCGGTAATACGGAGGATGCGAGCGTTA1530.33551160036840494No Hit
ATCCTACATCCGGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCT1520.3333187140914872No Hit
ATCCTACATCCGGACTACACGGGTTTCTAATCCTGTTCGATACCCGCACC1520.3333187140914872No Hit
ATACACCACGTGTGTCAGCCGCCGCGGTAATACGGAAGGTTCGGGCGTTA1490.3267400552607342No Hit
ATCCTACATCCGGACTACCGGGGTTTCTAATCCTGTTTGCTACCCACGCT1470.3223542827068988No Hit
ATCCTACATCCGGACTACTGGGGTTTCTAATCCTGTTCGCTCCCCATGCT1450.3179685101530635No Hit
ATACACCACGTGTGTCAGCAGCCGCGGTAATACGTATGTCACGAGCGTTA1440.3157756238761458No Hit
ATACACCACGTGTGCCAGCCGCCGCGGTAATACGTAGGGGGCAAGCGTTA1400.3070040787684751No Hit
ATCCTACATCCGGACTACGGGGGTATCTAATCCTGTTCGCTCCCCATGCT1350.29603964738388666No Hit
ATACACCACGTGTGTCAGCCGCCGCGGTAATACGGAGGATGCGAGCGTTA1280.2806894434454629No Hit
ATCCTACATCCGGACTACACGGGTTTCTAATCCTGTTCGCTCCCCATGCT1250.2741107846147099No Hit
ATCCTACATCCGGACTACCGGGGTTTCTAATCCTGTTCGATACCCGCACC1230.2697250120608745No Hit
ATACACCACGTGTGTCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTA1220.26753212578395685No Hit
ATCCTACATCCGGACTACCGGGGTTTCTAATCCTGTTCGCTCCCCATGCT1180.2587605806762861No Hit
ATACACCACGTGTGCCAGCCGCCGCGGTAATACGGAAGGTTCGGGCGTTA1180.2587605806762861No Hit
ATACACCACGTGTGCCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTA1140.2499890355686154No Hit
ATCCTACATCCGGACTACAGGGGTTTCTAATCCTGTTTGCTACCCACGCT1130.24779614929169774No Hit
ATCCTACATCCGGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCT1130.24779614929169774No Hit
ATCCTACATCCGGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCT1100.24121749046094468No Hit
ATACACCACGTGTGCCAGCCGCCGCGGTAATACGGAGGATGCGAGCGTTA1060.23244594535327395No Hit
ATCCTACATCCGGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCT1060.23244594535327395No Hit
ATACACCACGTGTGCCAGCAGCCGCGGTAATACGTATGTCACAAGCGTTA1030.22586728652252094No Hit
ATACACCACGTGTGCCAGCAGCCGCGGTAATACGTATGTCACGAGCGTTA990.21709574141485022No Hit
ATCCTACATCCGGACTACGAGGGTTTCTAATCCCGTTCGCTCCCCTGGCT980.21490285513793253No Hit
ATCCTACATCCGGACTACGGGGGTTTCTAATCCTGTTCGCTCCCCACGCT970.2127099688610149No Hit
ATACACCACGTGTGTCAGCAGCCGCGGTAATACGGAGGATACGAGCGTTA960.21051708258409718No Hit
ATCCTACATCCGGACTACGAGGGTATCTAATCCTGTTTGCTACCCACGCT960.21051708258409718No Hit
ATCCTACATCCGGACTACGCGGGTATCTAATCCCGTTCGCTCCCCTGGCT950.2083241963071795No Hit
ATCCTACATCCGGACTACTCGGGTTTCTAATCCCGTTCGCTCCCCTGGCT950.2083241963071795No Hit
ATCCTACATCCGGACTACTAGGGTTTCTAATCCTGTTTGCTACCCACGCT940.2061313100302618No Hit
ATCCTACATCCGGACTACAGGGGTTTCTAATCCTGTTCGATACCCGCACC940.2061313100302618No Hit
ATCCTACATCCGGACTACTCGGGTATCTAATCCTGTTCGATACCCGCACC900.1973597649225911No Hit
ATCCTACATCCGGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCC890.19516687864567342No Hit
ATCCTACATCCGGACTACTCGGGTATCTAATCCTGTTTGCTACCCACGCT880.19297399236875576No Hit
ATCCTACATCCGGACTACAGGGGTTTCTAATCCTGTTCGCTCCCCATGCT870.19078110609183807No Hit
ATACACCACGTGTGTCAGCAGCCGCGGTAATACGTAGGTGGCGAGCGTTG850.18639533353800272No Hit
ATACACCACGTGTGTCAGCCGCCGCGGTAATACGTATGTCACGAGCGTTA830.18200956098416735No Hit
ATCCTACATCCGGACTACCCGGGTTTCTAATCCCGTTCGCTCCCCTGGCT810.177623788430332No Hit
ATCCTACATCCGGACTACGAGGGTATCTAATCCTGTTCGATACCCGCACC800.17543090215341434No Hit
ATCCTACATCCGGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCT790.17323801587649665No Hit
ATACACCACGTGTGCCAGCAGCCGCGGTAATACGGAGGATACGAGCGTTA790.17323801587649665No Hit
ATCCTACATCCGGACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCT780.17104512959957896No Hit
ATCCTACATCCGGACTACTGGGGTATCTAATCCTGTTTGCTACCCACGCT780.17104512959957896No Hit
ATCCTACATCCGGACTACGCGGGTATCTAATCCTGTTTGATACCCGCACC770.16885224332266127No Hit
ATCCTACATCCGGACTACTAGGGTTTCTAATCCTGTTCGATACCCGCACC750.16446647076882592No Hit
ATCCTACATCCGGACTACGCGGGTTTCTAATCCTGTTTGATACCCACGCT750.16446647076882592No Hit
ATCCTACATCCGGACTACTCGGGTTTCTAATCCTGTTTGATACCCGCACC720.1578878119380729No Hit
ATACACCACGTGTGCCAGCCGCCGCGGTAATACGTATGTCACAAGCGTTA720.1578878119380729No Hit
ATCCTACATCCGGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCT710.1556949256611552No Hit
ATCCTACATCCGGACTACGCGGGTTTCTAATCCTGTTTGATCCCCACGCT710.1556949256611552No Hit
ATCCTACATCCGGACTACTCGGGTATCTAATCCTGTTCGCTCCCCATGCT690.15130915310731985No Hit
ATACACCACGTGTGTCAGCAGCCGCGGTAATACGTAGGTGGCGAGCGTTA680.1491162668304022No Hit
ATACACCACGTGTGCCAGCCGCCGCGGTAATACGTATGTCACGAGCGTTA670.1469233805534845No Hit
ATCCTACATCCGGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCT670.1469233805534845No Hit
ATCCTACATCCGGACTACTAGGGTTTCTAATCCTGTTCGCTCCCCATGCT660.1447304942765668No Hit
ATCCTACATCCGGACTACACGGGTATCTAATCCTGTTTGCTACCCACGCT660.1447304942765668No Hit
ATCCTACATCCGGACTACCAGGGTTTCTAATCCTGTTTGCTACCCACGCT660.1447304942765668No Hit
ATCCTACATCCGGACTACGCGGGTTTCTAATCCTGTTTGATACCCACACT640.14034472172273146No Hit
ATACACCACGTGTGTCAGCCGCCGCGGTAATACGTATGTCACAAGCGTTA640.14034472172273146No Hit
ATCCTACATCCGGACTACGAGGGTATCTAATCCTGTTCGCTCCCCATGCT640.14034472172273146No Hit
ATCCTACATCCGGACTACTCGGGTTTCTAATCCTGTTCGCTCCCCACGCT630.13815183544581378No Hit
ATCCTACATCCGGACTACCCGGGTTTCTAATCCTGTTTGATACCCGCACC630.13815183544581378No Hit
ATCCTACATCCGGACTACCAGGGTTTCTAATCCTGTTCGATACCCGCACC620.13595894916889611No Hit
ATCCTACATCCGGACTACGCGGGTATCTAATCCTGTTCGCTCCCCACGCT600.13157317661506074No Hit
ATACACCACGTGTGCCAGCAGCCGCGGTAATACGTAGGTGGCGAGCGTTA590.12938029033814305No Hit
ATCCTACATCCGGACTACAAGGGTTTCTAATCCTGTTTGCTACCCACGCT590.12938029033814305No Hit
ATCCTACATCCGGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCC580.1271874040612254No Hit
ATCCTACATCCGGACTACGGGGGTTTCTAATCCTGTTTGATACCCACGCT580.1271874040612254No Hit
ATCCTACATCCGGACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCT570.1249945177843077No Hit
ATCCTACATCCGGACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCT560.12280163150739003No Hit
ATCCTACATCCGGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCTAGCT560.12280163150739003No Hit
ATCCTACATCCGGACTACACGGGTTTCTAATCCTGTTTGATACCCGCACC560.12280163150739003No Hit
ATACACCACGTGTGTCAGCCGCCGCGGTAATACGTAGGTGGCGAGCGTTG560.12280163150739003No Hit
ATACACCACGTGTGTCAGCAGCCGCGGTAATACGTATGTCGCAAGCGTTA560.12280163150739003No Hit
ATCCTACATCCGGACTACGAGGGTTTCTAATCCTGTTTGATACCCGCACC550.12060874523047234No Hit
ATCCTACATCCGGACTACTGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT550.12060874523047234No Hit
ATCCTACATCCGGACTACGGGGGTTTCTAATCCTGTTTGATCCCCACGCT540.11841585895355468No Hit
ATCCTACATCCGGACTACACGGGTTTCTAATCCCGTTCGCTCCCCTGGCT540.11841585895355468No Hit
ATCCTACATCCGGACTACGAGGGTTTCTAATCCTGTTCGCTCCCCACGCT530.11622297267663698No Hit
ATACACCACGTGTGTCAGCAGCCGCGGTAATACGGGGGGTGCGAGCGTTA520.11403008639971932No Hit
ATCCTACATCCGGACTACGGGGGTATCTAATCCTGTTTGATACCCGCACC520.11403008639971932No Hit
ATACACCACGTGTGTCAGCCGCCGCGGTAATACGGAGGATACGAGCGTTA520.11403008639971932No Hit
ATACACCACGTGTGCCAGCCGCCGCGGTAATACGTAGGTGGCGAGCGTTG500.10964431384588395No Hit
ATCCTACATCCGGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCTAGCT500.10964431384588395No Hit
ATCCTACATCCGGACTACCCGGGTATCTAATCCTGTTTGCTACCCACGCT500.10964431384588395No Hit
ATCCTACATCCGGACTACTGGGGTATCTAATCCTGTTCGATACCCGCACC490.10745142756896627No Hit
ATCCTACATCCGGACTACAAGGGTTTCTAATCCTGTTCGATACCCGCACC480.10525854129204859No Hit
ATCCTACATCCGGACTACGGGGGTATCTAATCCCGTTCGCTCCCCTGGCT480.10525854129204859No Hit
ATCCTACATCCGGACTACGCGGGTTTCTAATCCTGTTCGATACCCGCACT480.10525854129204859No Hit
ATACACCACGTGTGTCAGCCGCCGCGGTAATACGTAGGTGGCGAGCGTTA480.10525854129204859No Hit
ATCCTACATCCGGACTACCCGGGTATCTAATCCTGTTCGCTCCCCATGCT470.1030656550151309No Hit
ATCCTACATCCGGACTACGGGGGTATCTAATCCTGTTCGCTCCCCACGCT470.1030656550151309No Hit
ATCCTACATCCGGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCT460.10087276873821324No Hit
ATACACCACGTGTGCCAGCAGCCGCGGTAATACGTAGGTGGCGAGCGTTG460.10087276873821324No Hit

[OK]Adapter Content

Adapter graph