FastQCFastQC Report
Mon 22 May 2023
EGAF00007838543

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007838543
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences552013397
Sequences flagged as poor quality0
Sequence length32-151
%GC29

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN7985209314.46560779755858No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG17249250.31247882920493686No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)