FastQCFastQC Report
Mon 13 May 2024
EGAF00007838793

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007838793
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences98287627
Total Bases7.3 Gbp
Sequences flagged as poor quality0
Sequence length75
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG44927314.571003632023795No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGG1107560.11268559775077283No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGG1005770.10232925859528585No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGG1000420.10178493779283125No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)