FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007839407

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007839407
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences627724
Sequences flagged as poor quality0
Sequence length35-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG13000.20709738674959058No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT8390.13365746729454347No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN7250.11549661953342552No Hit
ATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAG6940.11055814338785837No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)