FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007839415

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007839415
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences606098
Sequences flagged as poor quality0
Sequence length35-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT16260.2682734475282875No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT10640.17554916861629638No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT8110.13380674412388757No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN6530.10773835254364805No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)