FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007839437

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007839437
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences718024
Sequences flagged as poor quality0
Sequence length35-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG13380.1863447461366194No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT10890.1516662395685938No Hit
ATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAG9160.12757233741490534No Hit
GCATAATATAGCAAGGACTAACCCCTATACCTTCTGCATAATGAATTAAC7780.10835292413624058No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN7350.1023642663754972No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)