FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007839438

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007839438
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences718024
Sequences flagged as poor quality0
Sequence length35-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG13170.18342005281160517No Hit
ATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAG9120.12701525297204552No Hit
GCATAATATAGCAAGGACTAACCCCTATACCTTCTGCATAATGAATTAAC7630.10626385747551613No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN7290.10152863971120743No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)