FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007839499

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007839499
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences622457
Sequences flagged as poor quality0
Sequence length35-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT10950.17591576606898146No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG10110.16242085798697742No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT7730.12418528508796592No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT6740.10828057199131827No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN6620.1063527279796034No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)