FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007839618

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007839618
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences434002
Sequences flagged as poor quality0
Sequence length35-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG9910.2283399615669974No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA7610.1753448140791978No Hit
ATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAG5730.13202704135003984No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN5350.12327132133031644No Hit
GCATAATATAGCAAGGACTAACCCCTATACCTTCTGCATAATGAATTAAC4640.10691194971451745No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)