FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007839636

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007839636
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences579415
Sequences flagged as poor quality0
Sequence length35-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA17220.2971963100713651No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG15150.26147062123003373No Hit
ATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAG8300.14324793110292278No Hit
GCATAATATAGCAAGGACTAACCCCTATACCTTCTGCATAATGAATTAAC8220.14186722815253316No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN7690.13272007110620196No Hit
AGATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATAT6060.10458824849201351No Hit

[OK]Adapter Content

Adapter graph