FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007839680

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007839680
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences741548
Sequences flagged as poor quality0
Sequence length35-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG14540.19607631603078968No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN9440.12730126707913714No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA9390.12662700189333664No Hit
ATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAG8190.11044463743412429No Hit
GCATAATATAGCAAGGACTAACCCCTATACCTTCTGCATAATGAATTAAC8000.10788242972808233No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)