FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007839681

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007839681
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences804022
Sequences flagged as poor quality0
Sequence length35-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG17580.21865073343764227No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT13610.16927397509023384No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT10510.13071781617915926No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT9380.11666347438254177No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN9300.11566847673322371No Hit
GCATAATATAGCAAGGACTAACCCCTATACCTTCTGCATAATGAATTAAC8910.1108178631927982No Hit
ATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAG8450.1050966267092194No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)