FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007839682

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007839682
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences804022
Sequences flagged as poor quality0
Sequence length35-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG16600.20646201223349608No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA10930.13594155383807904No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN9190.1143003549654114No Hit
GCATAATATAGCAAGGACTAACCCCTATACCTTCTGCATAATGAATTAAC8060.10024601316879389No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)