FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007839705

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007839705
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences760073
Sequences flagged as poor quality0
Sequence length35-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG15910.20932199933427448No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT15170.19958609238849423No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT9390.12354076516334617No Hit
ATATAGTACCGCAAGGGAAAGATGAAAAATTATAACCAAGCATAATATAG8940.11762028120983117No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN8750.11512052131834706No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT8610.11327859297725351No Hit
GCATAATATAGCAAGGACTAACCCCTATACCTTCTGCATAATGAATTAAC8070.1061740122330355No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)