FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007839729

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007839729
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences741253
Sequences flagged as poor quality0
Sequence length35-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT10090.13612086561538367No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG8740.11790846040420748No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)