FastQCFastQC Report
Mon 22 May 2023
EGAF00007846485

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007846485
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21796047
Sequences flagged as poor quality0
Sequence length54
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGATCAT1565330.7181715106413562No Hit
ACTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGATCA407030.18674487167329012No Hit
CACTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGATC343920.15779008000854466No Hit
CTTCCGTACGCCACATGTCCCGCGCCCCGCCGCGGGGCGGGGATTCGGCGCTGG295690.13566221434556458No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)