FastQCFastQC Report
Thu 1 Jun 2023
EGAF00007846495

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007846495
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17018804
Sequences flagged as poor quality0
Sequence length54
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGATCAT3297191.937380558586843No Hit
ACTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGATCA996280.5853995380638968No Hit
CACTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGATC804560.47274767369081866No Hit
CCACTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGAT384940.22618510677953632No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG262710.1543645487661765No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)