FastQCFastQC Report
Sun 21 May 2023
EGAF00007846878

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007846878
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44334
Sequences flagged as poor quality0
Sequence length250
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTAAGCCTGTGTGTCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTA20464.614968195966978No Hit
ATTAAGCCTGTGTGTCAGCCGCCGCGGTAATACGTAGGGTGCGAGCGTTA13413.0247665448639873No Hit
ATTAAGCCTGTGTGTCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTG11102.503721748545135No Hit
ATTAAGCCTGTGTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTA11032.4879325122930482No Hit
ATTAAGCCTGTGTGTCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTA10772.4292867776424414No Hit
ATTAAGCCTGTGTGTCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTG8341.8811747191771553No Hit
ATTAAGCCTGTGTGTCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTG8291.8698966932828076No Hit
TAGGTGTACCCGGACTACTGGGGTTTCTAATCCTGTTTGCTACCCACGCT7651.7255379618351603No Hit
ATTAAGCCTGTGTGTCAGCAGCCGCGGTAATACGGAAGGTCCAGGCGTTA7481.6871926737943792No Hit
TAGGTGTACCCGGACTACGGGGGTTTCTAATCCTGTTTGCTACCCACGCT7461.6826814634366403No Hit
ATTAAGCCTGTGTGTCAGCCGCCGCGGTAATACGGAGGGTGCGAGCGTTA7091.599224071818469No Hit
ATTAAGCCTGTGTGCCAGCCGCCGCGGTAATACGTAGGGTGCGAGCGTTA6961.5699012044931653No Hit
TAGGTGTACCCGGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCT6751.5225334957369063No Hit
ATTAAGCCTGTGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTG6701.5112554698425587No Hit
TAGGTGTACCCGGACTACTCGGGTTTCTAATCCTGTTTGCTACCCACGCT6171.3917083953624758No Hit
TAGGTGTACCCGGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCT5981.3488518969639554No Hit
ATTAAGCCTGTGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTA5491.2383272431993504No Hit
ATTAAGCCTGTGTGTCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTG5431.2247936121261336No Hit
ATTAAGCCTGTGTGTCAGCCGCCGCGGTAATACGGAAGGTCCAGGCGTTA5291.1932151396219606No Hit
TAGGTGTACCCGGACTACCGGGGTTTCTAATCCTGTTTGCTACCCACGCT4861.0962241169305724No Hit
ATTAAGCCTGTGTGCCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTG4761.0736680651418775No Hit
TAGGTGTACCCGGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCT4681.0556232237109215No Hit
ATTAAGCCTGTGTGCCAGCAGCCGCGGTAATACGGAAGGTCCAGGCGTTA4491.0127667253124013No Hit
TAGGTGTACCCGGACTACTAGGGTTTCTAATCCTGTTTGCTACCCACGCT4491.0127667253124013No Hit
ATTAAGCCTGTGTGCCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTG4420.9969774890603149No Hit
TAGGTGTACCCGGACTACGCGGGTTTCTAATCCTGTTTGCTACCCACGCT4330.9766770424504894No Hit
ATTAAGCCTGTGTGTCAGCAGCCGCGGTAATACGTAGGGCGCGAGCGTTG4220.9518653854829251No Hit
TAGGTGTACCCGGACTACGAGGGTTTCTAATCCTGTTTGCTACCCACGCT4200.9473541751251862No Hit
ATTAAGCCTGTGTGTCAGCAGCCGCGGTAATACGGAGGATGCGAGCGTTA3830.8638967835070149No Hit
ATTAAGCCTGTGTGTCAGCAGCCGCGGTAATACGTATGTCACAAGCGTTA3810.859385573149276No Hit
TAGGTGTACCCGGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCT3810.859385573149276No Hit
TAGGTGTACCCGGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCT3690.832318311002842No Hit
ATTAAGCCTGTGTGCCAGCCGCCGCGGTAATACGGAGGGTGCGAGCGTTA3480.7849506022465826No Hit
TAGGTGTACCCGGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCT3420.7714169711733658No Hit
ATTAAGCCTGTGTGCCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTG3380.7623945504578878No Hit
ATTAAGCCTGTGTGCCAGCCGCCGCGGTAATACGGAAGGTCCAGGCGTTA3340.7533721297424099No Hit
TAGGTGTACCCGGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCT3290.7420941038480624No Hit
TAGGTGTACCCGGACTACTGGGGTATCTAATCCTGTTTGCTACCCACGCT3160.7127712365227591No Hit
TAGGTGTACCCGGACTACAGGGGTTTCTAATCCTGTTTGCTACCCACGCT2910.6563811070510217No Hit
TAGGTGTACCCGGACTACCCGGGTTTCTAATCCTGTTTGCTACCCACGCT2730.6157802138313709No Hit
ATTAAGCCTGTGTGTCAGCCGCCGCGGTAATACGTAGGGCGCGAGCGTTG2730.6157802138313709No Hit
TAGGTGTACCCGGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCT2680.6045021879370235No Hit
TAGGTGTACCCGGACTACGGGGGTATCTAATCCTGTTTGCTACCCACGCT2620.5909685568638066No Hit
TAGGTGTACCCGGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCT2600.5864573465060675No Hit
ATTAAGCCTGTGTGTCAGCCGCCGCGGTAATACGGAGGATGCGAGCGTTA2490.5616456895385031No Hit
ATTAAGCCTGTGTGCCAGCAGCCGCGGTAATACGTATGTCACAAGCGTTA2480.5593900843596337No Hit
TAGGTGTACCCGGACTACCAGGGTTTCTAATCCTGTTTGCTACCCACGCT2400.5413452429286778No Hit
ATTAAGCCTGTGTGCCAGCAGCCGCGGTAATACGTAGGGCGCGAGCGTTG2260.5097667704245049No Hit
ATTAAGCCTGTGTGTCAGCCGCCGCGGTAATACGTATGTCACAAGCGTTA2250.5075111652456354No Hit
TAGGTGTACCCGGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCT2240.5052555600667659No Hit
ATTAAGCCTGTGTGCCAGCAGCCGCGGTAATACGGAGGATGCGAGCGTTA2120.478188297920332No Hit
TAGGTGTACCCGGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCT1930.43533179952181167No Hit
TAGGTGTACCCGGACTACGGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT1860.4195425632697252No Hit
TAGGTGTACCCGGACTACTGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT1850.41728695809085575No Hit
TAGGTGTACCCGGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCT1850.41728695809085575No Hit
ATTAAGCCTGTGTGTCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTA1840.4150313529119863No Hit
TAGGTGTACCCGGACTACACGGGTTTCTAATCCTGTTTGCTACCCACGCT1830.41277574773311676No Hit
TAGGTGTACCCGGACTACTCGGGTATCTAATCCTGTTTGCTACCCACGCT1770.3992421166598999No Hit
TAGGTGTACCCGGACTACAAGGGTTTCTAATCCTGTTTGCTACCCACGCT1680.37894167005007445No Hit
TAGGTGTACCCGGACTACGCGGGTATCTAATCCTGTTTGCTACCCACGCT1660.37443045969233546No Hit
TAGGTGTACCCGGACTACGAGGGTATCTAATCCTGTTTGCTACCCACGCT1660.37443045969233546No Hit
TAGGTGTACCCGGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCT1660.37443045969233546No Hit
ATTAAGCCTGTGTGTCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTA1650.37217485451346594No Hit
TAGGTGTACCCGGACTACTAGGGTATCTAATCCTGTTTGCTACCCACGCT1630.367663644155727No Hit
TAGGTGTACCCGGACTACCGGGGTATCTAATCCTGTTTGCTACCCACGCT1500.3383407768304236No Hit
TAGGTGTACCCGGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCT1460.32931835611494564No Hit
ATTAAGCCTGTGTGCCAGCCGCCGCGGTAATACGTAGGGCGCGAGCGTTG1450.3270627509360761No Hit
ATTAAGCCTGTGTGCCAGCCGCCGCGGTAATACGTATGTCACAAGCGTTA1440.32480714575720665No Hit
ATTAAGCCTGTGTGCCAGCCGCCGCGGTAATACGGAGGATGCGAGCGTTA1390.3135291198628592No Hit
TAGGTGTACCCGGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCT1330.2999954887896423No Hit
TAGGTGTACCCGGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCT1310.2954842784319033No Hit
TAGGTGTACCCGGACTACAGGGGTATCTAATCCTGTTTGCTACCCACGCT1300.29322867325303376No Hit
TAGGTGTACCCGGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCT1300.29322867325303376No Hit
TAGGTGTACCCGGACTACTGGGGTTTCTAATCCTGTTTGATACCCGCACC1290.2909730680741643No Hit
TAGGTGTACCCGGACTACTCGGGTTTCTAATCCCGTTCGCTCCCCTGGCT1240.27969504217981683No Hit
TAGGTGTACCCGGACTACTCGGGTTTCTAATCCTGTTTGATACCCGCACC1210.27292822664320837No Hit
TAGGTGTACCCGGACTACGGGGGTTTCTAATCCTGTTTGATACCCGCACC1210.27292822664320837No Hit
ATTAAGCCTGTGTGTCAGCCGCCGCGGTAATACGTAGGGGGCAAGCGTTA1200.2706726214643389No Hit
ATTAAGCCTGTGTGTCAGCAGCCGCGGTAATACGGAAGGTCCGGGCGTTA1130.25488338521225246No Hit
TAGGTGTACCCGGACTACGCGGGTTTCTAATCCCGTTCGCTCCCCTGGCT1120.25262778003338293No Hit
TAGGTGTACCCGGACTACCGGGGTTTCTAATCCTGTTTGATACCCGCACC1110.25037217485451346No Hit
TAGGTGTACCCGGACTACGGGGGTTTCTAATCCTGTTCGATACCCGCACC1110.25037217485451346No Hit
TAGGTGTACCCGGACTACTCGGGTTTCTAATCCTGTTCGATACCCGCACC1110.25037217485451346No Hit
TAGGTGTACCCGGACTACTGGGGTTTCTAATCCTGTTTGATACCCACGCT1070.2413497541390355No Hit
TAGGTGTACCCGGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCT1060.239094148960166No Hit
TAGGTGTACCCGGACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCT1060.239094148960166No Hit
ATTAAGCCTGTGTGCCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTA1060.239094148960166No Hit
TAGGTGTACCCGGACTACTGGGGTTTCTAATCCTGTTCGATACCCGCACC1060.239094148960166No Hit
TAGGTGTACCCGGACTACTAGGGTTTCTAATCCCGTTCGCTCCCCTGGCT1020.23007172824468805No Hit
TAGGTGTACCCGGACTACTCGGGTTTCTAATCCTGTTTGATACCCACGCT990.2233049127080796No Hit
TAGGTGTACCCGGACTACCGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT980.22104930752921007No Hit
TAGGTGTACCCGGACTACGGGGGTTTCTAATCCTGTTCGCTCCCCATGCT950.21428249199260163No Hit
TAGGTGTACCCGGACTACTGGGGTTTCTAATCCTGTTCGCTCCCCATGCT940.21202688681373213No Hit
ATTAAGCCTGTGTGCCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTA930.2097712816348626No Hit
TAGGTGTACCCGGACTACGCGGGTTTCTAATCCTGTTTGATACCCGCACC910.20526007127712365No Hit
TAGGTGTACCCGGACTACGAGGGTTTCTAATCCCGTTCGCTCCCCTGGCT900.20300446609825418No Hit
ATTAAGCCTGTGTGTCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTA890.20074886091938468No Hit
TAGGTGTACCCGGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCT890.20074886091938468No Hit
TAGGTGTACCCGGACTACTGGGGTATCTAATCCCGTTCGCTCCCCTGGCT860.1939820453827762No Hit
TAGGTGTACCCGGACTACCGGGGTTTCTAATCCTGTTCGATACCCGCACC850.19172644020390672No Hit
TAGGTGTACCCGGACTACGGGGGTTTCTAATCCTGTTTGATACCCACGCT840.18947083502503723No Hit
TAGGTGTACCCGGACTACGCGGGTTTCTAATCCTGTTCGATACCCGCACC790.17819280913068977No Hit
ATTAAGCCTGTGTGTCAGCAGCCGCGGTAATACGTATGTCACGAGCGTTA780.17593720395182028No Hit
ATTAAGCCTGTGTGTCAGCAGCCGCGGTAATACGTATGTCGCAAGCGTTA770.17368159877295078No Hit
TAGGTGTACCCGGACTACTGGGGTTTCTAATCCTGTTCGCTCCCCACGCT760.1714259935940813No Hit
ATTAAGCCTGTGTGTCAGCCGCCGCGGTAATACGGAAGGTCCGGGCGTTA760.1714259935940813No Hit
TAGGTGTACCCGGACTACTAGGGTTTCTAATCCTGTTTGATACCCGCACC750.1691703884152118No Hit
TAGGTGTACCCGGACTACGAGGGTTTCTAATCCTGTTTGATACCCGCACC750.1691703884152118No Hit
TAGGTGTACCCGGACTACGCGGGTTTCTAATCCTGTTTGATACCCACGCT730.16465917805747282No Hit
ATTAAGCCTGTGTGTCAGCAGCCGCGGTAATACGTATGTCGCGAGCGTTA700.15789236252086433No Hit
TAGGTGTACCCGGACTACGGGGGTTTCTAATCCTGTTCGCTCCCCACGCT700.15789236252086433No Hit
TAGGTGTACCCGGACTACCGGGGTTTCTAATCCTGTTTGATACCCACGCT700.15789236252086433No Hit
TAGGTGTACCCGGACTACTCGGGTTTCTAATCCTGTTCGCTCCCCATGCT690.15563675734199486No Hit
TAGGTGTACCCGGACTACTAGGGTTTCTAATCCTGTTCGATACCCGCACC690.15563675734199486No Hit
ATTAAGCCTGTGTGCCAGCAGCCGCGGTAATACGGAAGGTCCGGGCGTTA670.15112554698425587No Hit
TAGGTGTACCCGGACTACCAGGGTATCTAATCCTGTTTGCTACCCACGCT660.1488699418053864No Hit
TAGGTGTACCCGGACTACTCGGGTTTCTAATCCTGTTCGCTCCCCACGCT660.1488699418053864No Hit
ATTAAGCCTGTGTGCCAGCCGCCGCGGTAATACGTAGGGGGCAAGCGTTA640.1443587314476474No Hit
TAGGTGTACCCGGACTACTGGGGTATCTAATCCTGTTCGATACCCGCACC630.1421031262687779No Hit
TAGGTGTACCCGGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCT630.1421031262687779No Hit
TAGGTGTACCCGGACTACCGGGGTTTCTAATCCTGTTCGCTCCCCATGCT620.13984752108990842No Hit
TAGGTGTACCCGGACTACGAGGGTTTCTAATCCTGTTTGATACCCACGCT610.13759191591103892No Hit
TAGGTGTACCCGGACTACAGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT610.13759191591103892No Hit
ATTAAGCCTGTGTGCCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTA600.13533631073216945No Hit
TAGGTGTACCCGGACTACCCGGGTTTCTAATCCCGTTCGCTCCCCTGGCT590.13308070555329995No Hit
TAGGTGTACCCGGACTACGAGGGTTTCTAATCCTGTTCGATACCCGCACC590.13308070555329995No Hit
TAGGTGTACCCGGACTACAGGGGTTTCTAATCCTGTTTGATACCCGCACC570.12856949519556096No Hit
TAGGTGTACCCGGACTACAAGGGTATCTAATCCTGTTTGCTACCCACGCT560.12631389001669147No Hit
ATTAAGCCTGTGTGTCAGCAGCCGCGGTAATACGGAAGGTTCGGGCGTTA550.124058284837822No Hit
TAGGTGTACCCGGACTACGCGGGTTTCTAATCCTGTTCGCTCCCCATGCT550.124058284837822No Hit
ATTAAGCCTGTGTGCCAGCCGCCGCGGTAATACGGAAGGTCCGGGCGTTA550.124058284837822No Hit
ATTAAGCCTGTGTGCCAGCAGCCGCGGTAATACGTATGTCACGAGCGTTA550.124058284837822No Hit
TAGGTGTACCCGGACTACGGGGGTATCTAATCCTGTTTGATACCCGCACC550.124058284837822No Hit
ATTAAGCCTGTGTGTCAGCAGCCGCGGTAATACGGGGGGTGCGAGCGTTA540.12180267965895249No Hit
TAGGTGTACCCGGACTACCAGGGTTTCTAATCCTGTTTGATACCCGCACC540.12180267965895249No Hit
TAGGTGTACCCGGACTACACGGGTATCTAATCCTGTTTGCTACCCACGCT520.11729146930121352No Hit
ATTAAGCCTGTGTGTCAGCCGCCGCGGTAATACGTATGTCGCGAGCGTTA520.11729146930121352No Hit
TAGGTGTACCCGGACTACTGGGGTATCTAATCCTGTTTGATACCCACGCT510.11503586412234403No Hit
ATTAAGCCTGTGTGCCAGCAGCCGCGGTAATACGTATGTCGCGAGCGTTA510.11503586412234403No Hit
ATTAAGCCTGTGTGTCAGCAGCCGCGGTAATACGTAGGTGGCGAGCGTTA500.11278025894347454No Hit
TAGGTGTACCCGGACTACCCGGGTATCTAATCCTGTTTGCTACCCACGCT500.11278025894347454No Hit
ATTAAGCCTGTGTGTCAGCAGCCGCGGTAATACGTAGGTGGCGAGCGTTG490.11052465376460503No Hit
TAGGTGTACCCGGACTACGGGGGTATCTAATCCCGTTCGCTCCCCTGGCT490.11052465376460503No Hit
TAGGTGTACCCGGACTACCGGGGTATCTAATCCCGTTCGCTCCCCTGGCT490.11052465376460503No Hit
TAGGTGTACCCGGACTACAGGGGTTTCTAATCCTGTTCGATACCCGCACC480.10826904858573555No Hit
TAGGTGTACCCGGACTACTAGGGTTTCTAATCCTGTTCGCTCCCCATGCT480.10826904858573555No Hit
ATTAAGCCTGTGTGTCAGCCGCCGCGGTAATACGTATGTCACGAGCGTTA480.10826904858573555No Hit
TAGGTGTACCCGGACTACTAGGGTTTCTAATCCTGTTTGATACCCACGCT470.10601344340686607No Hit
TAGGTGTACCCGGACTACGAGGGTTTCTAATCCTGTTCGCTCCCCATGCT470.10601344340686607No Hit
TAGGTGTACCCGGACTACCCGGGTTTCTAATCCTGTTCGATACCCGCACC470.10601344340686607No Hit
TAGGTGTACCCGGACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCT460.10375783822799657No Hit
TAGGTGTACCCGGACTACGCGGGTTTCTAATCCTGTTCGCTCCCCACGCT460.10375783822799657No Hit
TAGGTGTACCCGGACTACGCGGGTATCTAATCCCGTTCGCTCCCCTGGCT450.10150223304912709No Hit
TAGGTGTACCCGGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCT450.10150223304912709No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)