FastQCFastQC Report
Sun 21 May 2023
EGAF00007846879

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007846879
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44334
Sequences flagged as poor quality0
Sequence length250
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTAAGCCTGTGTGTCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTA18934.2698606035999465No Hit
ATTAAGCCTGTGTGTCAGCCGCCGCGGTAATACGTAGGGTGCGAGCGTTA12232.758605133757387No Hit
ATTAAGCCTGTGTGTCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTG10762.427031172463572No Hit
TAGGTGTACCCGGACTACTGGGGTTTCTAATCCTGTTTGCTACCCACGCT9652.1766589976090587No Hit
ATTAAGCCTGTGTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTA9592.1631253665358416No Hit
TAGGTGTACCCGGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCT8932.014255424730455No Hit
ATTAAGCCTGTGTGTCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTA8671.9556096900798483No Hit
TAGGTGTACCCGGACTACGGGGGTTTCTAATCCTGTTTGCTACCCACGCT7701.7368159877295077No Hit
ATTAAGCCTGTGTGTCAGCAGCCGCGGTAATACGGAAGGTCCAGGCGTTA7461.6826814634366403No Hit
TAGGTGTACCCGGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCT7121.6059908873550774No Hit
ATTAAGCCTGTGTGTCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTG6921.5608787837776876No Hit
ATTAAGCCTGTGTGTCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTG6831.540578337167862No Hit
ATTAAGCCTGTGTGCCAGCCGCCGCGGTAATACGTAGGGTGCGAGCGTTA6801.5338115216312538No Hit
ATTAAGCCTGTGTGTCAGCCGCCGCGGTAATACGGAGGGTGCGAGCGTTA6381.439076104118735No Hit
TAGGTGTACCCGGACTACGCGGGTTTCTAATCCTGTTTGCTACCCACGCT5901.3308070555329996No Hit
TAGGTGTACCCGGACTACTCGGGTTTCTAATCCTGTTTGCTACCCACGCT5651.2744169260612623No Hit
ATTAAGCCTGTGTGTCAGCCGCCGCGGTAATACGGAAGGTCCAGGCGTTA5421.2225380069472638No Hit
ATTAAGCCTGTGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTG5331.2022375603374384No Hit
ATTAAGCCTGTGTGTCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTG5191.1706590878332657No Hit
TAGGTGTACCCGGACTACGAGGGTTTCTAATCCTGTTTGCTACCCACGCT5121.1548698515811793No Hit
ATTAAGCCTGTGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTA5101.1503586412234403No Hit
TAGGTGTACCCGGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCT5001.1278025894347454No Hit
TAGGTGTACCCGGACTACCGGGGTTTCTAATCCTGTTTGCTACCCACGCT4491.0127667253124013No Hit
ATTAAGCCTGTGTGCCAGCAGCCGCGGTAATACGGAAGGTCCAGGCGTTA4390.9902106735237065No Hit
TAGGTGTACCCGGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCT4350.9811882528082284No Hit
TAGGTGTACCCGGACTACTAGGGTTTCTAATCCTGTTTGCTACCCACGCT4280.965399016556142No Hit
TAGGTGTACCCGGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCT4210.9496097803040556No Hit
ATTAAGCCTGTGTGTCAGCAGCCGCGGTAATACGGAGGATGCGAGCGTTA4050.9135200974421437No Hit
ATTAAGCCTGTGTGTCAGCAGCCGCGGTAATACGTATGTCACAAGCGTTA4020.9067532819055353No Hit
TAGGTGTACCCGGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCT3980.8977308611900573No Hit
ATTAAGCCTGTGTGCCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTG3910.8819416249379708No Hit
ATTAAGCCTGTGTGCCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTG3790.854874362791537No Hit
ATTAAGCCTGTGTGTCAGCAGCCGCGGTAATACGTAGGGCGCGAGCGTTG3660.8255514954662335No Hit
TAGGTGTACCCGGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCT3660.8255514954662335No Hit
ATTAAGCCTGTGTGCCAGCCGCCGCGGTAATACGGAGGGTGCGAGCGTTA3470.7826949970677132No Hit
TAGGTGTACCCGGACTACTGGGGTATCTAATCCTGTTTGCTACCCACGCT3330.7511165245635404No Hit
TAGGTGTACCCGGACTACAGGGGTTTCTAATCCTGTTTGCTACCCACGCT3260.735327288311454No Hit
TAGGTGTACCCGGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCT3130.7060044209861506No Hit
ATTAAGCCTGTGTGCCAGCCGCCGCGGTAATACGGAAGGTCCAGGCGTTA3080.6947263950918031No Hit
ATTAAGCCTGTGTGTCAGCCGCCGCGGTAATACGTATGTCACAAGCGTTA3000.6766815536608471No Hit
ATTAAGCCTGTGTGTCAGCCGCCGCGGTAATACGGAGGATGCGAGCGTTA2960.6676591329453693No Hit
TAGGTGTACCCGGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCT2770.6248026345468489No Hit
TAGGTGTACCCGGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCT2590.584201741327198No Hit
ATTAAGCCTGTGTGTCAGCCGCCGCGGTAATACGTAGGGCGCGAGCGTTG2590.584201741327198No Hit
ATTAAGCCTGTGTGCCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTG2570.5796905309694591No Hit
TAGGTGTACCCGGACTACGGGGGTATCTAATCCTGTTTGCTACCCACGCT2530.5706681102539811No Hit
TAGGTGTACCCGGACTACTGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT2390.5390896377498082No Hit
TAGGTGTACCCGGACTACCCGGGTTTCTAATCCTGTTTGCTACCCACGCT2320.5233004014977218No Hit
ATTAAGCCTGTGTGCCAGCAGCCGCGGTAATACGTATGTCACAAGCGTTA2230.5029999548878964No Hit
TAGGTGTACCCGGACTACCAGGGTTTCTAATCCTGTTTGCTACCCACGCT2220.5007443497090269No Hit
ATTAAGCCTGTGTGCCAGCAGCCGCGGTAATACGGAGGATGCGAGCGTTA2150.4849551134569405No Hit
ATTAAGCCTGTGTGTCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTA2050.46239906166824557No Hit
TAGGTGTACCCGGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCT2020.4556322461316371No Hit
TAGGTGTACCCGGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCT2010.45337664095276764No Hit
TAGGTGTACCCGGACTACGGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT1820.4105201425542473No Hit
TAGGTGTACCCGGACTACTCGGGTATCTAATCCTGTTTGCTACCCACGCT1800.40600893219650835No Hit
TAGGTGTACCCGGACTACACGGGTTTCTAATCCTGTTTGCTACCCACGCT1790.40375332701763883No Hit
TAGGTGTACCCGGACTACTGGGGTTTCTAATCCTGTTTGATACCCGCACC1760.3969865114810304No Hit
TAGGTGTACCCGGACTACGGGGGTTTCTAATCCTGTTTGATACCCGCACC1760.3969865114810304No Hit
TAGGTGTACCCGGACTACAAGGGTTTCTAATCCTGTTTGCTACCCACGCT1720.3879640907655524No Hit
TAGGTGTACCCGGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCT1690.3811972752289439No Hit
ATTAAGCCTGTGTGCCAGCAGCCGCGGTAATACGTAGGGCGCGAGCGTTG1690.3811972752289439No Hit
TAGGTGTACCCGGACTACGAGGGTATCTAATCCTGTTTGCTACCCACGCT1620.3654080389768575No Hit
TAGGTGTACCCGGACTACGCGGGTATCTAATCCTGTTTGCTACCCACGCT1580.35638561826137954No Hit
ATTAAGCCTGTGTGTCAGCAGCCGCGGTAATACGGAAGGTCCGGGCGTTA1560.35187440790364055No Hit
TAGGTGTACCCGGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCT1500.3383407768304236No Hit
TAGGTGTACCCGGACTACTGGGGTTTCTAATCCTGTTCGCTCCCCATGCT1470.33157396129381517No Hit
TAGGTGTACCCGGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCT1390.3135291198628592No Hit
TAGGTGTACCCGGACTACTGGGGTTTCTAATCCTGTTCGATACCCGCACC1380.3112735146839897No Hit
TAGGTGTACCCGGACTACGGGGGTTTCTAATCCTGTTCGATACCCGCACC1330.2999954887896423No Hit
ATTAAGCCTGTGTGCCAGCCGCCGCGGTAATACGGAGGATGCGAGCGTTA1310.2954842784319033No Hit
TAGGTGTACCCGGACTACCGGGGTATCTAATCCTGTTTGCTACCCACGCT1310.2954842784319033No Hit
TAGGTGTACCCGGACTACGCGGGTTTCTAATCCCGTTCGCTCCCCTGGCT1300.29322867325303376No Hit
TAGGTGTACCCGGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCT1300.29322867325303376No Hit
TAGGTGTACCCGGACTACTCGGGTTTCTAATCCCGTTCGCTCCCCTGGCT1260.2842062525375558No Hit
TAGGTGTACCCGGACTACTGGGGTTTCTAATCCTGTTTGATACCCACGCT1250.28195064735868636No Hit
TAGGTGTACCCGGACTACCGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT1230.27743943700094736No Hit
TAGGTGTACCCGGACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCT1210.27292822664320837No Hit
ATTAAGCCTGTGTGCCAGCCGCCGCGGTAATACGTATGTCACAAGCGTTA1210.27292822664320837No Hit
TAGGTGTACCCGGACTACGGGGGTTTCTAATCCTGTTTGATACCCACGCT1210.27292822664320837No Hit
TAGGTGTACCCGGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCT1200.2706726214643389No Hit
TAGGTGTACCCGGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCT1190.2684170162854694No Hit
ATTAAGCCTGTGTGCCAGCCGCCGCGGTAATACGTAGGGCGCGAGCGTTG1190.2684170162854694No Hit
TAGGTGTACCCGGACTACTAGGGTTTCTAATCCCGTTCGCTCCCCTGGCT1150.25939459556999145No Hit
TAGGTGTACCCGGACTACTAGGGTATCTAATCCTGTTTGCTACCCACGCT1150.25939459556999145No Hit
TAGGTGTACCCGGACTACGAGGGTTTCTAATCCCGTTCGCTCCCCTGGCT1140.2571389903911219No Hit
ATTAAGCCTGTGTGTCAGCCGCCGCGGTAATACGTAGGGGGCAAGCGTTA1120.25262778003338293No Hit
ATTAAGCCTGTGTGCCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTA1060.239094148960166No Hit
ATTAAGCCTGTGTGTCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTA1050.23683854378129654No Hit
TAGGTGTACCCGGACTACAGGGGTATCTAATCCTGTTTGCTACCCACGCT1050.23683854378129654No Hit
TAGGTGTACCCGGACTACGGGGGTTTCTAATCCTGTTCGCTCCCCATGCT1050.23683854378129654No Hit
TAGGTGTACCCGGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCT1030.23232733342355752No Hit
TAGGTGTACCCGGACTACGCGGGTTTCTAATCCTGTTTGATACCCGCACC1020.23007172824468805No Hit
TAGGTGTACCCGGACTACTCGGGTTTCTAATCCTGTTCGATACCCGCACC980.22104930752921007No Hit
ATTAAGCCTGTGTGTCAGCCGCCGCGGTAATACGGAAGGTCCGGGCGTTA980.22104930752921007No Hit
ATTAAGCCTGTGTGCCAGCCGCCGCGGTAATACGTAGGGGGCAAGCGTTA960.2165380971714711No Hit
TAGGTGTACCCGGACTACTCGGGTTTCTAATCCTGTTTGATACCCGCACC910.20526007127712365No Hit
TAGGTGTACCCGGACTACTGGGGTTTCTAATCCTGTTCGCTCCCCACGCT840.18947083502503723No Hit
TAGGTGTACCCGGACTACCAGGGTATCTAATCCTGTTTGCTACCCACGCT830.18721522984616773No Hit
TAGGTGTACCCGGACTACGGGGGTTTCTAATCCTGTTCGCTCCCCACGCT800.18044841430955924No Hit
ATTAAGCCTGTGTGCCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTA790.17819280913068977No Hit
TAGGTGTACCCGGACTACTCGGGTTTCTAATCCTGTTCGCTCCCCATGCT780.17593720395182028No Hit
TAGGTGTACCCGGACTACGCGGGTTTCTAATCCTGTTCGATACCCGCACC780.17593720395182028No Hit
TAGGTGTACCCGGACTACTCGGGTTTCTAATCCTGTTTGATACCCACGCT760.1714259935940813No Hit
TAGGTGTACCCGGACTACTAGGGTTTCTAATCCTGTTTGATACCCGCACC750.1691703884152118No Hit
TAGGTGTACCCGGACTACAGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT750.1691703884152118No Hit
TAGGTGTACCCGGACTACTGGGGTATCTAATCCCGTTCGCTCCCCTGGCT740.16691478323634232No Hit
TAGGTGTACCCGGACTACGCGGGTTTCTAATCCTGTTCGCTCCCCATGCT720.16240357287860333No Hit
TAGGTGTACCCGGACTACGCGGGTTTCTAATCCTGTTTGATACCCACGCT720.16240357287860333No Hit
TAGGTGTACCCGGACTACCGGGGTTTCTAATCCTGTTTGATACCCGCACC710.16014796769973386No Hit
ATTAAGCCTGTGTGTCAGCAGCCGCGGTAATACGTATGTCGCAAGCGTTA690.15563675734199486No Hit
ATTAAGCCTGTGTGTCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTA690.15563675734199486No Hit
ATTAAGCCTGTGTGTCAGCAGCCGCGGTAATACGTATGTCGCGAGCGTTA680.15338115216312537No Hit
TAGGTGTACCCGGACTACAGGGGTTTCTAATCCTGTTTGATACCCGCACC660.1488699418053864No Hit
TAGGTGTACCCGGACTACGAGGGTTTCTAATCCTGTTTGATACCCGCACC660.1488699418053864No Hit
TAGGTGTACCCGGACTACGAGGGTTTCTAATCCTGTTCGCTCCCCATGCT650.14661433662651688No Hit
TAGGTGTACCCGGACTACGAGGGTTTCTAATCCTGTTCGATACCCGCACC640.1443587314476474No Hit
TAGGTGTACCCGGACTACCGGGGTTTCTAATCCTGTTTGATACCCACGCT640.1443587314476474No Hit
TAGGTGTACCCGGACTACGCGGGTTTCTAATCCTGTTCGCTCCCCACGCT640.1443587314476474No Hit
TAGGTGTACCCGGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCT600.13533631073216945No Hit
TAGGTGTACCCGGACTACGAGGGTTTCTAATCCTGTTCGCTCCCCACGCT590.13308070555329995No Hit
TAGGTGTACCCGGACTACCGGGGTTTCTAATCCTGTTCGATACCCGCACC590.13308070555329995No Hit
TAGGTGTACCCGGACTACTAGGGTTTCTAATCCTGTTTGATACCCACGCT590.13308070555329995No Hit
TAGGTGTACCCGGACTACTGGGGTATCTAATCCTGTTCGCTCCCCATGCT590.13308070555329995No Hit
ATTAAGCCTGTGTGTCAGCAGCCGCGGTAATACGGAAGGTTCGGGCGTTA570.12856949519556096No Hit
TAGGTGTACCCGGACTACAGGGGTTTCTAATCCTGTTCGATACCCGCACC570.12856949519556096No Hit
TAGGTGTACCCGGACTACCGGGGTTTCTAATCCTGTTCGCTCCCCATGCT570.12856949519556096No Hit
ATTAAGCCTGTGTGCCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTA560.12631389001669147No Hit
TAGGTGTACCCGGACTACCAGGGTTTCTAATCCCGTTCGCTCCCCTGGCT560.12631389001669147No Hit
ATTAAGCCTGTGTGCCAGCAGCCGCGGTAATACGGAAGGTCCGGGCGTTA550.124058284837822No Hit
TAGGTGTACCCGGACTACCCGGGTTTCTAATCCCGTTCGCTCCCCTGGCT550.124058284837822No Hit
ATTAAGCCTGTGTGCCAGCCGCCGCGGTAATACGGAAGGTCCGGGCGTTA550.124058284837822No Hit
TAGGTGTACCCGGACTACTCGGGTTTCTAATCCTGTTCGCTCCCCACGCT550.124058284837822No Hit
ATTAAGCCTGTGTGTCAGCAGCCGCGGTAATACGTAGGTGGCGAGCGTTA540.12180267965895249No Hit
TAGGTGTACCCGGACTACCCGGGTATCTAATCCTGTTTGCTACCCACGCT540.12180267965895249No Hit
TAGGTGTACCCGGACTACTGGGGTATCTAATCCTGTTTGATACCCGCACC540.12180267965895249No Hit
TAGGTGTACCCGGACTACTAGGGTTTCTAATCCTGTTCGCTCCCCATGCT540.12180267965895249No Hit
TAGGTGTACCCGGACTACGAGGGTTTCTAATCCTGTTTGATACCCACGCT530.119547074480083No Hit
ATTAAGCCTGTGTGTCAGCAGCCGCGGTAATACGGGGGGTGCGAGCGTTA530.119547074480083No Hit
TAGGTGTACCCGGACTACGGGGGTATCTAATCCTGTTTGATACCCGCACC530.119547074480083No Hit
TAGGTGTACCCGGACTACAGGGGTTTCTAATCCTGTTCGCTCCCCACGCT520.11729146930121352No Hit
ATTAAGCCTGTGTGTCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTA500.11278025894347454No Hit
TAGGTGTACCCGGACTACGGGGGTATCTAATCCCGTTCGCTCCCCTGGCT500.11278025894347454No Hit
ATTAAGCCTGTGTGTCAGCAGCCGCGGTAATACGTATGTCACGAGCGTTA490.11052465376460503No Hit
TAGGTGTACCCGGACTACCCGGGTTTCTAATCCTGTTTGATACCCGCACC490.11052465376460503No Hit
TAGGTGTACCCGGACTACAAGGGTATCTAATCCTGTTTGCTACCCACGCT490.11052465376460503No Hit
TAGGTGTACCCGGACTACTAGGGTTTCTAATCCTGTTCGATACCCGCACC490.11052465376460503No Hit
ATTAAGCCTGTGTGTCAGCAGCCGCGGTAATACGGAGGATACGAGCGTTA490.11052465376460503No Hit
TAGGTGTACCCGGACTACTGGGGTATCTAATCCTGTTCGATACCCGCACC480.10826904858573555No Hit
TAGGTGTACCCGGACTACCAGGGTTTCTAATCCTGTTCGATACCCGCACC460.10375783822799657No Hit
ATTAAGCCTGTGTGTCAGCCGCCGCGGTAATACGTATGTCGCAAGCGTTA460.10375783822799657No Hit
TAGGTGTACCCGGACTACAGGGGTTTCTAATCCTGTTTGATACCCACGCT450.10150223304912709No Hit
TAGGTGTACCCGGACTACTGGGGTATCTAATCCTGTTTGATACCCACGCT450.10150223304912709No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)