FastQCFastQC Report
Sun 21 May 2023
EGAF00007846976

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007846976
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41279
Sequences flagged as poor quality0
Sequence length250
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGTACAATGTGTGTCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTA13943.3770197921461276No Hit
TGGTACAATGTGTGTCAGCCGCCGCGGTAATACGTAGGGTGCGAGCGTTA12463.0184839749024928No Hit
TGGTACAATGTGTGTCAGCCGCCGCGGTAATACGGGGGGTGCGAGCGTTA10492.5412437316795464No Hit
TGGTACAATGTGTGTCAGCAGCCGCGGTAATACGGGGGGTGCGAGCGTTA10042.432229462923036No Hit
TGGTACAATGTGTGTCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTG7141.7296930642699677No Hit
TCTAAGTTGCCGGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCT6671.6158337169020567No Hit
TGGTACAATGTGTGTCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTG6501.5746505487051528No Hit
TCTAAGTTGCCGGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCT5711.3832699435548343No Hit
TGGTACAATGTGTGTCAGCAGCCGCGGTAATACGGAAGGTCCAGGCGTTA5691.3784248649434336No Hit
TCTAAGTTGCCGGACTACTGGGGTTTCTAATCCTGTTTGCTACCCACGCT5651.3687347077206327No Hit
TCTAAGTTGCCGGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCT5641.3663121684149326No Hit
TGGTACAATGTGTGTCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTA5621.361467089803532No Hit
TGGTACAATGTGTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTA5531.33966423605223No Hit
TGGTACAATGTGTGTCAGCCGCCGCGGTAATACGGAAGGTCCAGGCGTTA5481.3275515395237287No Hit
TGGTACAATGTGTGTCAGCCGCCGCGGTAATACGGAGGGTGCGAGCGTTA5361.298481067855326No Hit
TGGTACAATGTGTGCCAGCCGCCGCGGTAATACGTAGGGTGCGAGCGTTA5211.2621429782698224No Hit
TGGTACAATGTGTGTCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTG5071.2282274279900192No Hit
TCTAAGTTGCCGGACTACTCGGGTTTCTAATCCTGTTTGCTACCCACGCT5061.225804888684319No Hit
TGGTACAATGTGTGTCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTG4891.184621720487415No Hit
TCTAAGTTGCCGGACTACGGGGGTTTCTAATCCTGTTTGCTACCCACGCT4581.1095230020107076No Hit
TGGTACAATGTGTGCCAGCAGCCGCGGTAATACGGGGGGTGCGAGCGTTA4571.1071004627050074No Hit
TCTAAGTTGCCGGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCT4431.0731849124252042No Hit
TCTAAGTTGCCGGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCT4371.0586496765910027No Hit
TCTAAGTTGCCGGACTACCGGGGTTTCTAATCCTGTTTGCTACCCACGCT4231.0247341263111993No Hit
TGGTACAATGTGTGCCAGCCGCCGCGGTAATACGGGGGGTGCGAGCGTTA3870.9375227113059911No Hit
TCTAAGTTGCCGGACTACGCGGGTTTCTAATCCTGTTTGCTACCCACGCT3820.9254100147774897No Hit
TCTAAGTTGCCGGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCT3770.9132973182489885No Hit
TGGTACAATGTGTGTCAGCAGCCGCGGTAATACGGAGGATGCGAGCGTTA3360.8139732067152788No Hit
TCTAAGTTGCCGGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCT3290.7970154315753774No Hit
TCTAAGTTGCCGGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCT3200.7752125778240752No Hit
TCTAAGTTGCCGGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCT2990.7243392524043702No Hit
TGGTACAATGTGTGTCAGCAGCCGCGGTAATACGTATGTCACAAGCGTTA2960.7170716344872695No Hit
TCTAAGTTGCCGGACTACTAGGGTTTCTAATCCTGTTTGCTACCCACGCT2890.7001138593473679No Hit
TCTAAGTTGCCGGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCT2790.6758884662903655No Hit
TCTAAGTTGCCGGACTACGAGGGTTTCTAATCCTGTTTGCTACCCACGCT2790.6758884662903655No Hit
TGGTACAATGTGTGCCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTG2790.6758884662903655No Hit
TCTAAGTTGCCGGACTACCCGGGTTTCTAATCCTGTTTGCTACCCACGCT2770.6710433876789651No Hit
TGGTACAATGTGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTG2710.6565081518447636No Hit
TGGTACAATGTGTGCCAGCAGCCGCGGTAATACGGAAGGTCCAGGCGTTA2620.6347052980934615No Hit
TCTAAGTTGCCGGACTACTGGGGTATCTAATCCTGTTTGCTACCCACGCT2620.6347052980934615No Hit
TGGTACAATGTGTGTCAGCCGCCGCGGTAATACGGAGGATGCGAGCGTTA2590.6274376801763608No Hit
TGGTACAATGTGTGTCAGCCGCCGCGGTAATACGTATGTCACAAGCGTTA2450.5935221298965575No Hit
TGGTACAATGTGTGCCAGCCGCCGCGGTAATACGGAAGGTCCAGGCGTTA2390.5789868940623561No Hit
TGGTACAATGTGTGTCAGCAGCCGCGGTAATACGTAGGGCGCGAGCGTTG2370.5741418154509557No Hit
TCTAAGTTGCCGGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCT2290.5547615010053538No Hit
TCTAAGTTGCCGGACTACAGGGGTTTCTAATCCTGTTTGCTACCCACGCT2290.5547615010053538No Hit
TGGTACAATGTGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTA2270.5499164223939533No Hit
TGGTACAATGTGTGCCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTG2270.5499164223939533No Hit
TCTAAGTTGCCGGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCT2240.5426488044768527No Hit
TCTAAGTTGCCGGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCT2200.5329586472540517No Hit
TCTAAGTTGCCGGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCT2200.5329586472540517No Hit
TCTAAGTTGCCGGACTACGGGGGTATCTAATCCTGTTTGCTACCCACGCT2190.5305361079483515No Hit
TGGTACAATGTGTGCCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTG2170.525691029336951No Hit
TCTAAGTTGCCGGACTACCAGGGTTTCTAATCCTGTTTGCTACCCACGCT2090.506310714891349No Hit
TGGTACAATGTGTGTCAGCAGCCGCGGTAATACGGAAGGTCCGGGCGTTA2060.49904309697424837No Hit
TGGTACAATGTGTGCCAGCCGCCGCGGTAATACGGAGGGTGCGAGCGTTA2050.4966205576685482No Hit
TGGTACAATGTGTGTCAGCCGCCGCGGTAATACGTAGGGCGCGAGCGTTG1990.4820853218343467No Hit
TCTAAGTTGCCGGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCT1990.4820853218343467No Hit
TCTAAGTTGCCGGACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCT1900.4602824680830447No Hit
TCTAAGTTGCCGGACTACTCGGGTATCTAATCCTGTTTGCTACCCACGCT1870.4530148501659439No Hit
TGGTACAATGTGTGTCAGCCGCCGCGGTAATACGTAGGGGGCAAGCGTTA1710.4142542212747402No Hit
TCTAAGTTGCCGGACTACACGGGTTTCTAATCCTGTTTGCTACCCACGCT1690.4094091426633397No Hit
TGGTACAATGTGTGTCAGCCGCCGCGGTAATACGGAAGGTCCGGGCGTTA1650.39971898544053874No Hit
TGGTACAATGTGTGTCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTA1650.39971898544053874No Hit
TCTAAGTTGCCGGACTACGAGGGTATCTAATCCTGTTTGCTACCCACGCT1650.39971898544053874No Hit
TCTAAGTTGCCGGACTACCGGGGTATCTAATCCTGTTTGCTACCCACGCT1590.38518374960633733No Hit
TCTAAGTTGCCGGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCT1560.37791613168923666No Hit
TCTAAGTTGCCGGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCT1520.36822597446643573No Hit
TCTAAGTTGCCGGACTACTCGGGTTTCTAATCCTGTTCGATACCCGCACC1470.35611327793793457No Hit
TCTAAGTTGCCGGACTACTGGGGTTTCTAATCCTGTTCGATACCCGCACC1430.3464231207151336No Hit
TCTAAGTTGCCGGACTACGCGGGTATCTAATCCTGTTTGCTACCCACGCT1430.3464231207151336No Hit
TGGTACAATGTGTGTCAGCCGCCGCGGTAATACGTATGTCACGAGCGTTA1400.3391555027980329No Hit
TGGTACAATGTGTGTCAGCAGCCGCGGTAATACGTATGTCACGAGCGTTA1370.3318878848809322No Hit
TGGTACAATGTGTGCCAGCCGCCGCGGTAATACGGAGGATGCGAGCGTTA1340.3246202669638315No Hit
TCTAAGTTGCCGGACTACAAGGGTTTCTAATCCTGTTTGCTACCCACGCT1310.3173526490467308No Hit
TCTAAGTTGCCGGACTACTAGGGTATCTAATCCTGTTTGCTACCCACGCT1280.3100850311296301No Hit
TCTAAGTTGCCGGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCT1270.30766249182392985No Hit
TGGTACAATGTGTGCCAGCAGCCGCGGTAATACGGAGGATGCGAGCGTTA1250.30281741321252936No Hit
TCTAAGTTGCCGGACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCT1230.29797233460112893No Hit
TCTAAGTTGCCGGACTACGGGGGTTTCTAATCCTGTTCGATACCCGCACC1230.29797233460112893No Hit
TCTAAGTTGCCGGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCT1210.29312725598972844No Hit
TGGTACAATGTGTGTCAGCCGCCGCGGTAATACGGAGGATACGAGCGTTA1160.2810145594612273No Hit
TGGTACAATGTGTGTCAGCAGCCGCGGTAATACGGAGGATACGAGCGTTA1140.2761694808498268No Hit
TGGTACAATGTGTGCCAGCAGCCGCGGTAATACGTATGTCACAAGCGTTA1050.2543666270985247No Hit
TCTAAGTTGCCGGACTACCCGGGTATCTAATCCTGTTTGCTACCCACGCT1050.2543666270985247No Hit
TCTAAGTTGCCGGACTACGCGGGTTTCTAATCCTGTTCGATACCCGCACC1050.2543666270985247No Hit
TCTAAGTTGCCGGACTACCGGGGTTTCTAATCCTGTTCGATACCCGCACC990.23983139126432326No Hit
TGGTACAATGTGTGCCAGCCGCCGCGGTAATACGTAGGGCGCGAGCGTTG950.23014123404152234No Hit
TCTAAGTTGCCGGACTACAGGGGTATCTAATCCTGTTTGCTACCCACGCT940.2277186947358221No Hit
TGGTACAATGTGTGCCAGCCGCCGCGGTAATACGTATGTCACAAGCGTTA930.22529615543012185No Hit
TGGTACAATGTGTGTCAGCCGCCGCGGTAATACGGAAGGTTCGGGCGTTA920.2228736161244216No Hit
TGGTACAATGTGTGTCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTA920.2228736161244216No Hit
TGGTACAATGTGTGCCAGCAGCCGCGGTAATACGTAGGGCGCGAGCGTTG910.22045107681872136No Hit
TGGTACAATGTGTGTCAGCAGCCGCGGTAATACGGAAGGTTCGGGCGTTA890.21560599820732093No Hit
TCTAAGTTGCCGGACTACGGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT890.21560599820732093No Hit
TCTAAGTTGCCGGACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCT880.2131834589016207No Hit
TGGTACAATGTGTGCCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTA860.2083383802902202No Hit
TGGTACAATGTGTGCCAGCCGCCGCGGTAATACGGAAGGTCCGGGCGTTA860.2083383802902202No Hit
TCTAAGTTGCCGGACTACCCGGGTTTCTAATCCTGTTCGATACCCGCACC840.2034933016788197No Hit
TCTAAGTTGCCGGACTACCAGGGTATCTAATCCTGTTTGCTACCCACGCT830.20107076237311952No Hit
TCTAAGTTGCCGGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCT800.1938031444560188No Hit
TGGTACAATGTGTGTCAGCAGCCGCGGTAATACGTATGTCGCAAGCGTTA780.18895806584461833No Hit
TGGTACAATGTGTGCCAGCAGCCGCGGTAATACGGAAGGTCCGGGCGTTA780.18895806584461833No Hit
TCTAAGTTGCCGGACTACTGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT780.18895806584461833No Hit
TCTAAGTTGCCGGACTACTGGGGTATCTAATCCTGTTCGATACCCGCACC770.18653552653891808No Hit
TCTAAGTTGCCGGACTACTAGGGTTTCTAATCCTGTTCGATACCCGCACC770.18653552653891808No Hit
TCTAAGTTGCCGGACTACTGGGGTTTCTAATCCTGTTCGCTCCCCACGCT760.18411298723321787No Hit
TCTAAGTTGCCGGACTACACGGGTATCTAATCCTGTTTGCTACCCACGCT760.18411298723321787No Hit
TGGTACAATGTGTGTCAGCCGCCGCGGTAATACGTATGTCGCAAGCGTTA740.17926790862181738No Hit
TCTAAGTTGCCGGACTACTGGGGTTTCTAATCCTGTTTGATACCCGCACC740.17926790862181738No Hit
TCTAAGTTGCCGGACTACTCGGGTTTCTAATCCCGTTCGCTCCCCTGGCT740.17926790862181738No Hit
TGGTACAATGTGTGTCAGCCGCCGCGGTAATACGGAGGGTGCAAGCGTTA720.17442283001041692No Hit
TGGTACAATGTGTGTCAGCAGCCGCGGTAATACGTAGGTGGCGAGCGTTG700.16957775139901646No Hit
TGGTACAATGTGTGCCAGCCGCCGCGGTAATACGTATGTCACGAGCGTTA700.16957775139901646No Hit
TCTAAGTTGCCGGACTACGGGGGTATCTAATCCTGTTCGATACCCGCACC690.1671552120933162No Hit
TGGTACAATGTGTGCCAGCCGCCGCGGTAATACGTAGGGGGCAAGCGTTA680.16473267278761597No Hit
TCTAAGTTGCCGGACTACTCGGGTTTCTAATCCTGTTTGATACCCACGCT670.16231013348191575No Hit
TCTAAGTTGCCGGACTACTGGGGTTTCTAATCCTGTTTGATACCCACGCT660.1598875941762155No Hit
TCTAAGTTGCCGGACTACAAGGGTATCTAATCCTGTTTGCTACCCACGCT640.15504251556481505No Hit
TCTAAGTTGCCGGACTACGCGGGTTTCTAATCCCGTTCGCTCCCCTGGCT640.15504251556481505No Hit
TCTAAGTTGCCGGACTACGAGGGTTTCTAATCCTGTTCGATACCCGCACC630.1526199762591148No Hit
TGGTACAATGTGTGTCAGCAGCCGCGGTAATACGTATGTCGCGAGCGTTA630.1526199762591148No Hit
TCTAAGTTGCCGGACTACCGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT620.1501974369534146No Hit
TCTAAGTTGCCGGACTACAGGGGTTTCTAATCCTGTTCGATACCCGCACC610.14777489764771434No Hit
TGGTACAATGTGTGTCAGCCGCCGCGGTAATACGTATGTCGCGAGCGTTA610.14777489764771434No Hit
TCTAAGTTGCCGGACTACACGGGTTTCTAATCCTGTTCGATACCCGCACC600.1453523583420141No Hit
TGGTACAATGTGTGCCAGCAGCCGCGGTAATACGTATGTCACGAGCGTTA600.1453523583420141No Hit
TCTAAGTTGCCGGACTACCCGGGTTTCTAATCCCGTTCGCTCCCCTGGCT600.1453523583420141No Hit
TCTAAGTTGCCGGACTACGGGGGTTTCTAATCCTGTTTGATACCCGCACC570.1380847404249134No Hit
TGGTACAATGTGTGTCAGCCGCCGCGGTAATACGTAGGTGGCGAGCGTTG550.13323966181351293No Hit
TCTAAGTTGCCGGACTACTCGGGTTTCTAATCCTGTTTGATACCCGCACC550.13323966181351293No Hit
TGGTACAATGTGTGTCAGCCGCCGCGGTAATACGTAGGGTGCAAGCGTTA530.12839458320211247No Hit
TGGTACAATGTGTGTCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTA520.12597204389641223No Hit
TCTAAGTTGCCGGACTACTGGGGTTTCTAATCCTGTTTGATCCCCACGCT520.12597204389641223No Hit
TGGTACAATGTGTGTCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTA520.12597204389641223No Hit
TCTAAGTTGCCGGACTACGGGGGTTTCTAATCCTGTTCGCTCCCCACGCT510.12354950459071198No Hit
TCTAAGTTGCCGGACTACTAGGGTTTCTAATCCCGTTCGCTCCCCTGGCT490.11870442597931151No Hit
TCTAAGTTGCCGGACTACCGGGGTTTCTAATCCTGTTTGATACCCGCACC490.11870442597931151No Hit
TGGTACAATGTGTGTCAGCCGCCGCGGTAACACGTAAGGGGCGAGCGTTG490.11870442597931151No Hit
TCTAAGTTGCCGGACTACTCGGGTTTCTAATCCTGTTCGCTCCCCACGCT490.11870442597931151No Hit
TGGTACAATGTGTGTCAGCCGCCGCGGTAATACGTAGGGGGCTAGCGTTA490.11870442597931151No Hit
TGGTACAATGTGTGTCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTA490.11870442597931151No Hit
TCTAAGTTGCCGGACTACGGGGGTTTCTAATCCTGTTCGCTCCCCATGCT480.11628188667361126No Hit
TGGTACAATGTGTGCCAGCAGCCGCGGTAATACGGAAGGTTCGGGCGTTA480.11628188667361126No Hit
TCTAAGTTGCCGGACTACCAGGGTTTCTAATCCTGTTCGATACCCGCACC480.11628188667361126No Hit
TCTAAGTTGCCGGACTACAAGGGTTTCTAATCCTGTTCGATACCCGCACC480.11628188667361126No Hit
TCTAAGTTGCCGGACTACTCGGGTATCTAATCCTGTTCGATACCCGCACC480.11628188667361126No Hit
TCTAAGTTGCCGGACTACGGGGGTTTCTAATCCTGTTTGATACCCACGCT470.11385934736791105No Hit
TCTAAGTTGCCGGACTACGAGGGTTTCTAATCCCGTTCGCTCCCCTGGCT470.11385934736791105No Hit
TGGTACAATGTGTGCCAGCAGCCGCGGTAATACGGAGGATACGAGCGTTA470.11385934736791105No Hit
TCTAAGTTGCCGGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCT470.11385934736791105No Hit
TCTAAGTTGCCGGACTACTCGGGTTTCTAATCCTGTTTGATCCCCACGCT470.11385934736791105No Hit
TGGTACAATGTGTGCCAGCCGCCGCGGTAATACGGAAGGTTCGGGCGTTA470.11385934736791105No Hit
TCTAAGTTGCCGGACTACCGGGGTTTCTAATCCTGTTTGATACCCACGCT460.1114368080622108No Hit
TCTAAGTTGCCGGACTACTGGGGTTTCTAATCCTGTTCGCTCCCCATGCT460.1114368080622108No Hit
TCTAAGTTGCCGGACTACGGGGGTTTCTAATCCTGTTTGATCCCCACGCT450.10901426875651056No Hit
TGGTACAATGTGTGTCAGCAGCCGCGGTAATACGTAGGTGGCGAGCGTTA440.10659172945081034No Hit
TCTAAGTTGCCGGACTACGCGGGTTTCTAATCCTGTTTGATACCCGCACC420.10174665083940986No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)