FastQCFastQC Report
Sun 21 May 2023
EGAF00007847114

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007847114
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23605
Sequences flagged as poor quality0
Sequence length250
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AATTGAGTCGTGTGTCAGCCGCCGCGGTAATACGGGGGGTGCGAGCGTTA8383.5500953187883924No Hit
AATTGAGTCGTGTGCCAGCCGCCGCGGTAATACGGGGGGTGCGAGCGTTA6282.6604532937936876No Hit
AATTGAGTCGTGTGTCAGCAGCCGCGGTAATACGGGGGGTGCGAGCGTTA5812.4613429358186822No Hit
AATTGAGTCGTGTGTCAGCCGCCGCGGTAATACGTAGGGTGCGAGCGTTA4752.0122855327261173No Hit
AATTGAGTCGTGTGCCAGCAGCCGCGGTAATACGGGGGGTGCGAGCGTTA4161.7623384876085575No Hit
TCTACTACTCCGGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCT3711.571700910823978No Hit
TCTACTACTCCGGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCT3671.5547553484431265No Hit
AATTGAGTCGTGTGCCAGCCGCCGCGGTAATACGTAGGGTGCGAGCGTTA3501.4827367083245075No Hit
TCTACTACTCCGGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCT3331.4107180682058886No Hit
TCTACTACTCCGGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCT3181.3471722092776954No Hit
AATTGAGTCGTGTGTCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTA3151.3344630374920567No Hit
AATTGAGTCGTGTGTCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTG2991.2666807879686506No Hit
TCTACTACTCCGGACTACGGGGGTTTCTAATCCTGTTTGCTACCCACGCT2851.2073713196356703No Hit
TCTACTACTCCGGACTACGCGGGTTTCTAATCCTGTTTGCTACCCACGCT2731.1565346324931158No Hit
TCTACTACTCCGGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCT2731.1565346324931158No Hit
TCTACTACTCCGGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCT2711.1480618513026901No Hit
TCTACTACTCCGGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCT2631.114170726540987No Hit
AATTGAGTCGTGTGTCAGCCGCCGCGGTAATACGTATGTCACAAGCGTTA2441.0336793052319424No Hit
AATTGAGTCGTGTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTA2401.016733742851091No Hit
AATTGAGTCGTGTGTCAGCCGCCGCGGTAATACGGAGGATGCGAGCGTTA2350.9955517898750263No Hit
TCTACTACTCCGGACTACTGGGGTTTCTAATCCTGTTTGCTACCCACGCT2320.9828426180893879No Hit
TCTACTACTCCGGACTACTCGGGTTTCTAATCCTGTTTGCTACCCACGCT2320.9828426180893879No Hit
AATTGAGTCGTGTGTCAGCCGCCGCGGTAATACGGAAGGTCCAGGCGTTA2140.906587587375556No Hit
TCTACTACTCCGGACTACCGGGGTTTCTAATCCTGTTTGCTACCCACGCT2100.8896420249947045No Hit
AATTGAGTCGTGTGTCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTG1990.8430417284473628No Hit
AATTGAGTCGTGTGCCAGCCGCCGCGGTAATACGTATGTCACAAGCGTTA1980.8388053378521501No Hit
AATTGAGTCGTGTGTCAGCAGCCGCGGTAATACGTATGTCACAAGCGTTA1880.7964414319000211No Hit
TCTACTACTCCGGACTACCCGGGTTTCTAATCCTGTTTGCTACCCACGCT1860.7879686507095954No Hit
AATTGAGTCGTGTGCCAGCCGCCGCGGTAATACGGAAGGTCCAGGCGTTA1820.7710230883287439No Hit
AATTGAGTCGTGTGTCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTG1810.766786697733531No Hit
TCTACTACTCCGGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCT1800.7625503071383181No Hit
AATTGAGTCGTGTGCCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTG1770.7498411353526796No Hit
AATTGAGTCGTGTGTCAGCAGCCGCGGTAATACGGAAGGTCCAGGCGTTA1720.7286591823766151No Hit
AATTGAGTCGTGTGTCAGCAGCCGCGGTAATACGGAGGATGCGAGCGTTA1700.7201864011861894No Hit
AATTGAGTCGTGTGTCAGCCGCCGCGGTAATACGTATGTCACGAGCGTTA1670.7074772294005507No Hit
TCTACTACTCCGGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCT1630.6905316670196993No Hit
TCTACTACTCCGGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCT1600.6778224952340606No Hit
AATTGAGTCGTGTGTCAGCCGCCGCGGTAATACGTAGGGGGCAAGCGTTA1580.6693497140436347No Hit
AATTGAGTCGTGTGCCAGCCGCCGCGGTAATACGGAGGATGCGAGCGTTA1570.6651133234484219No Hit
TCTACTACTCCGGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCT1570.6651133234484219No Hit
AATTGAGTCGTGTGCCAGCAGCCGCGGTAATACGTATGTCACAAGCGTTA1500.6354585892819318No Hit
TCTACTACTCCGGACTACAGGGGTTTCTAATCCTGTTTGCTACCCACGCT1500.6354585892819318No Hit
AATTGAGTCGTGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTG1470.6227494174962931No Hit
AATTGAGTCGTGTGCCAGCCGCCGCGGTAATACGGAGGGTGCGAGCGTTA1440.6100402457106545No Hit
AATTGAGTCGTGTGTCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTG1430.6058038551154417No Hit
AATTGAGTCGTGTGCCAGCAGCCGCGGTAATACGGAAGGTCCAGGCGTTA1400.593094683329803No Hit
AATTGAGTCGTGTGTCAGCCGCCGCGGTAATACGGAGGGTGCGAGCGTTA1370.5803855115441643No Hit
AATTGAGTCGTGTGTCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTA1300.5507307773776742No Hit
TCTACTACTCCGGACTACTAGGGTTTCTAATCCTGTTTGCTACCCACGCT1300.5507307773776742No Hit
AATTGAGTCGTGTGCCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTG1290.5464943867824613No Hit
TCTACTACTCCGGACTACGAGGGTTTCTAATCCTGTTTGCTACCCACGCT1290.5464943867824613No Hit
TCTACTACTCCGGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCT1280.5422579961872485No Hit
TCTACTACTCCGGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCT1250.5295488244016098No Hit
AATTGAGTCGTGTGTCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTA1240.5253124338063969No Hit
AATTGAGTCGTGTGCCAGCAGCCGCGGTAATACGGAGGATGCGAGCGTTA1240.5253124338063969No Hit
TCTACTACTCCGGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCT1230.5210760432111841No Hit
AATTGAGTCGTGTGTCAGCAGCCGCGGTAATACGTATGTCACGAGCGTTA1170.4956576996399068No Hit
TCTACTACTCCGGACTACGGGGGTATCTAATCCTGTTTGCTACCCACGCT1170.4956576996399068No Hit
AATTGAGTCGTGTGTCAGCCGCCGCGGTAATACGGAGGATACGAGCGTTA1160.49142130904469394No Hit
TCTACTACTCCGGACTACCAGGGTTTCTAATCCTGTTTGCTACCCACGCT1130.4787121372590553No Hit
AATTGAGTCGTGTGCCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTG1110.47023935606862954No Hit
TCTACTACTCCGGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCT1060.44905740309256514No Hit
AATTGAGTCGTGTGCCAGCCGCCGCGGTAATACGTATGTCACGAGCGTTA1060.44905740309256514No Hit
TCTACTACTCCGGACTACACGGGTTTCTAATCCTGTTTGCTACCCACGCT1030.4363482313069265No Hit
AATTGAGTCGTGTGCCAGCCGCCGCGGTAATACGTAGGGGGCAAGCGTTA1000.4236390595212879No Hit
AATTGAGTCGTGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTA1000.4236390595212879No Hit
AATTGAGTCGTGTGTCAGCAGCCGCGGTAATACGGAGGATACGAGCGTTA970.4109298877356492No Hit
TCTACTACTCCGGACTACGCGGGTATCTAATCCTGTTTGCTACCCACGCT970.4109298877356492No Hit
AATTGAGTCGTGTGCCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTA960.40669349714043634No Hit
TCTACTACTCCGGACTACTCGGGTATCTAATCCTGTTTGCTACCCACGCT940.3982207159500106No Hit
TCTACTACTCCGGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCT920.38974793475958486No Hit
TCTACTACTCCGGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCT900.38127515356915903No Hit
AATTGAGTCGTGTGTCAGCCGCCGCGGTAATACGGAAGGTCCGGGCGTTA860.36432959118830754No Hit
TCTACTACTCCGGACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCT860.36432959118830754No Hit
AATTGAGTCGTGTGCCAGCCGCCGCGGTAATACGGAGGATACGAGCGTTA860.36432959118830754No Hit
TCTACTACTCCGGACTACTGGGGTATCTAATCCTGTTTGCTACCCACGCT820.34738402880745606No Hit
AATTGAGTCGTGTGTCAGCCGCCGCGGTAATACGTAGGGCGCGAGCGTTG790.3346748570218174No Hit
TCTACTACTCCGGACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCT760.3219656852361788No Hit
AATTGAGTCGTGTGCCAGCAGCCGCGGTAATACGTATGTCACGAGCGTTA750.3177292946409659No Hit
TCTACTACTCCGGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCT730.3092565134505401No Hit
TCTACTACTCCGGACTACGAGGGTATCTAATCCTGTTTGCTACCCACGCT720.30502012285532726No Hit
AATTGAGTCGTGTGTCAGCAGCCGCGGTAATACGTAGGGCGCGAGCGTTG710.3007837322601144No Hit
AATTGAGTCGTGTGCCAGCCGCCGCGGTAATACGGAAGGTCCGGGCGTTA700.2965473416649015No Hit
AATTGAGTCGTGTGTCAGCCGCCGCGGTAATACGGAGGGTGCAAGCGTTA690.29231095106968863No Hit
TCTACTACTCCGGACTACCGGGGTATCTAATCCTGTTTGCTACCCACGCT690.29231095106968863No Hit
TCTACTACTCCGGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCT680.2880745604744757No Hit
AATTGAGTCGTGTGCCAGCCGCCGCGGTAATACGTAGGGCGCGAGCGTTG670.2838381698792629No Hit
TCTACTACTCCGGACTACAGGGGTATCTAATCCTGTTTGCTACCCACGCT630.2668926074984113No Hit
TCTACTACTCCGGACTACAAGGGTTTCTAATCCTGTTTGCTACCCACGCT630.2668926074984113No Hit
TCTACTACTCCGGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCT620.26265621690319846No Hit
AATTGAGTCGTGTGTCAGCCGCCGCGGTAATACGTATGTCGCAAGCGTTA620.26265621690319846No Hit
AATTGAGTCGTGTGTCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTA600.25418343571277274No Hit
TCTACTACTCCGGACTACGCGGGTTTCTAATCCTGTTCGATACCCGCACC600.25418343571277274No Hit
AATTGAGTCGTGTGTCAGCAGCCGCGGTAATACGGAAGGTCCGGGCGTTA590.24994704511755983No Hit
AATTGAGTCGTGTGCCAGCAGCCGCGGTAATACGGAGGATACGAGCGTTA590.24994704511755983No Hit
AATTGAGTCGTGTGCCAGCCGCCGCGGTAATACGGAGGGTGCAAGCGTTA530.22452870154628257No Hit
TCTACTACTCCGGACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCT520.2202923109510697No Hit
TCTACTACTCCGGACTACGAGGGTTTCTAATCCTGTTCGATACCCGCACC520.2202923109510697No Hit
AATTGAGTCGTGTGTCAGCCGCCGCGGTAATACGTAGGGGGCTAGCGTTA510.21605592035585683No Hit
AATTGAGTCGTGTGCCAGCAGCCGCGGTAATACGGAAGGTCCGGGCGTTA500.21181952976064394No Hit
TCTACTACTCCGGACTACGGGGGTTTCTAATCCTGTTCGATACCCGCACC490.20758313916543103No Hit
TCTACTACTCCGGACTACTCGGGTTTCTAATCCTGTTCGATACCCGCACC490.20758313916543103No Hit
AATTGAGTCGTGTGTCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTA470.1991103579750053No Hit
TCTACTACTCCGGACTACACGGGTATCTAATCCTGTTTGCTACCCACGCT470.1991103579750053No Hit
TCTACTACTCCGGACTACGGGGGTTTCTAATCCTGTTTGATCCCCACGCT460.19487396737979243No Hit
TCTACTACTCCGGACTACGGGGGTTTCTAATCCTGTTTGATACCCACGCT460.19487396737979243No Hit
TCTACTACTCCGGACTACCCGGGTATCTAATCCTGTTTGCTACCCACGCT450.19063757678457952No Hit
AATTGAGTCGTGTGTCAGCAGCCGCGGTAATACGTATGTCGCAAGCGTTA450.19063757678457952No Hit
TCTACTACTCCGGACTACCGGGGTTTCTAATCCTGTTCGATACCCGCACC420.1779284049989409No Hit
TCTACTACTCCGGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCT420.1779284049989409No Hit
TCTACTACTCCGGACTACTCGGGTTTCTAATCCTGTTTGATCCCCACGCT410.17369201440372803No Hit
AATTGAGTCGTGTGCCAGCCGCCGCGGTAATACGTATGTCGCGAGCGTTA400.16945562380851514No Hit
AATTGAGTCGTGTGCCAGCCGCCGCGGTAATACGTAGGGGGCTAGCGTTA390.16521923321330229No Hit
AATTGAGTCGTGTGCCAGCCGCCGCGGTAATACGTATGTCGCAAGCGTTA390.16521923321330229No Hit
TCTACTACTCCGGACTACGGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT390.16521923321330229No Hit
TCTACTACTCCGGACTACGCGGGTTTCTAATCCCGTTCGCTCCCCTGGCT390.16521923321330229No Hit
TCTACTACTCCGGACTACGCGGGTTTCTAATCCTGTTTGATCCCCACGCT390.16521923321330229No Hit
AATTGAGTCGTGTGCCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTA390.16521923321330229No Hit
TCTACTACTCCGGACTACTGGGGTTTCTAATCCTGTTCGATACCCGCACC380.1609828426180894No Hit
TCTACTACTCCGGACTACTCGGGTTTCTAATCCCGTTCGCTCCCCTGGCT370.15674645202287651No Hit
TCTACTACTCCGGACTACGCGGGTTTCTAATCCTGTTTGATACCCACGCT370.15674645202287651No Hit
AATTGAGTCGTGTGCCAGCAGCCGCGGTAATACGTAGGGCGCGAGCGTTG360.15251006142766363No Hit
AATTGAGTCGTGTGTCAGCAGCCGCGGTAATACGTATGTCGCGAGCGTTA350.14827367083245074No Hit
AATTGAGTCGTGTGTCAGCCGCCGCGGTAACACGTAAGGGGCGAGCGTTG350.14827367083245074No Hit
TCTACTACTCCGGACTACCGGGGTTTCTAATCCTGTTTGATCCCCACGCT340.14403728023723786No Hit
AATTGAGTCGTGTGTCAGCAGCCGCGGTAATACGTAGGTGGCGAGCGTTG330.139800889642025No Hit
TCTACTACTCCGGACTACTAGGGTATCTAATCCTGTTTGCTACCCACGCT330.139800889642025No Hit
AATTGAGTCGTGTGTCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTA320.13556449904681211No Hit
AATTGAGTCGTGTGTCAGCCGCCGCGGTAATACGTAGGTGGCGAGCGTTA320.13556449904681211No Hit
TCTACTACTCCGGACTACCAGGGTTTCTAATCCTGTTCGATACCCGCACC310.13132810845159923No Hit
TCTACTACTCCGGACTACGCGGGTTTCTAATCCTGTTCGCTCCCCACGCT310.13132810845159923No Hit
TCTACTACTCCGGACTACCGGGGTTTCTAATCCTGTTTGATACCCACGCT310.13132810845159923No Hit
TCTACTACTCCGGACTACCCGGGTTTCTAATCCTGTTTGATCCCCACGCT310.13132810845159923No Hit
TCTACTACTCCGGACTACTGGGGTTTCTAATCCTGTTTGATCCCCACGCT310.13132810845159923No Hit
AATTGAGTCGTGTGTCAGCCGCCGCGGTAATACGTATGTCGCGAGCGTTA300.12709171785638637No Hit
AATTGAGTCGTGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTA290.12285532726117349No Hit
AATTGAGTCGTGTGTCAGCAGCCGCGGTAACACGTAAGGGGCGAGCGTTG290.12285532726117349No Hit
AATTGAGTCGTGTGCCAGCAGCCGCGGTAATACGTATGTCGCAAGCGTTA290.12285532726117349No Hit
TCTACTACTCCGGACTACCAGGGTATCTAATCCTGTTTGCTACCCACGCT290.12285532726117349No Hit
TCTACTACTCCGGACTACAAGGGTATCTAATCCTGTTTGCTACCCACGCT280.11861893666596059No Hit
TCTACTACTCCGGACTACTAGGGTTTCTAATCCTGTTCGATACCCGCACC270.11438254607074771No Hit
AATTGAGTCGTGTGCCAGCAGCCGCGGTAATACGTATGTCGCGAGCGTTA270.11438254607074771No Hit
TCTACTACTCCGGACTACTCGGGTTTCTAATCCTGTTTGATACCCACGCT260.11014615547553484No Hit
TCTACTACTCCGGACTACGGGGGTTTCTAATCCTGTTCGCTCCCCATGCT260.11014615547553484No Hit
TCTACTACTCCGGACTACCCGGGTTTCTAATCCTGTTCGATACCCGCACC260.11014615547553484No Hit
TCTACTACTCCGGACTACGGGGGTTTCTAATCCTGTTCGCTCCCCACGCT260.11014615547553484No Hit
TCTACTACTCCGGACTACAGGGGTTTCTAATCCTGTTCGATACCCGCACC260.11014615547553484No Hit
TCTACTACTCCGGACTACTGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT260.11014615547553484No Hit
AATTGAGTCGTGTGTCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTA260.11014615547553484No Hit
AATTGAGTCGTGTGTCAGCAGCCGCGGTAACACGTAAGGTGCGAGCGTTG250.10590976488032197No Hit
TCTACTACTCCGGACTACCGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT250.10590976488032197No Hit
TCTACTACTCCGGACTACCCGGGTTTCTAATCCTGTTTGATACCCACGCT250.10590976488032197No Hit
TCTACTACTCCGGACTACTGGGGTTTCTAATCCTGTTTGATACCCGCACC250.10590976488032197No Hit
AATTGAGTCGTGTGCCAGCCGCCGCGGTAACACGTAAGGGGCGAGCGTTG240.10167337428510909No Hit
TCTACTACTCCGGACTACTCGGGTTTCTAATCCTGTTCGATACCCGCACT240.10167337428510909No Hit
TCTACTACTCCGGACTACAGGGGTTTCTAATCCTGTTTGATACCCACGCT240.10167337428510909No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)