FastQCFastQC Report
Sun 21 May 2023
EGAF00007847197

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007847197
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29970
Sequences flagged as poor quality0
Sequence length250
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTCTATCCGTGTGTCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTG11323.7771104437771106No Hit
ATTCTATCCGTGTGTCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTA9093.0330330330330333No Hit
TCTCTAAGACCGGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCT6582.195528862195529No Hit
ATTCTATCCGTGTGCCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTG6042.015348682015349No Hit
ATTCTATCCGTGTGTCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTG6002.002002002002002No Hit
TCTCTAAGACCGGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCT5821.941941941941942No Hit
ATTCTATCCGTGTGTCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTG5451.818485151818485No Hit
TCTCTAAGACCGGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCT5351.7851184517851184No Hit
TCTCTAAGACCGGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCT5191.7317317317317318No Hit
ATTCTATCCGTGTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTA5091.6983650316983652No Hit
ATTCTATCCGTGTGTCAGCCGCCGCGGTAATACGTAGGGTGCGAGCGTTA4801.6016016016016015No Hit
TCTCTAAGACCGGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCT4191.3980647313980648No Hit
TCTCTAAGACCGGACTACTGGGGTTTCTAATCCTGTTTGCTACCCACGCT4071.3580246913580247No Hit
TCTCTAAGACCGGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCT3871.2912912912912913No Hit
ATTCTATCCGTGTGCCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTG3851.2846179512846179No Hit
TCTCTAAGACCGGACTACGGGGGTTTCTAATCCTGTTTGCTACCCACGCT3571.1911911911911912No Hit
ATTCTATCCGTGTGTCAGCAGCCGCGGTAATACGGAAGGTCCAGGCGTTA3551.1845178511845178No Hit
TCTCTAAGACCGGACTACGCGGGTTTCTAATCCTGTTTGCTACCCACGCT3371.1244577911244578No Hit
ATTCTATCCGTGTGTCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTA3071.0243576910243577No Hit
TCTCTAAGACCGGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCT3051.0176843510176843No Hit
ATTCTATCCGTGTGTCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTG2980.9943276609943277No Hit
ATTCTATCCGTGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTG2970.990990990990991No Hit
TCTCTAAGACCGGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCT2870.9576242909576242No Hit
TCTCTAAGACCGGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCT2800.9342676009342675No Hit
ATTCTATCCGTGTGTCAGCAGCCGCGGTAATACGTAGGGCGCGAGCGTTG2790.9309309309309309No Hit
TCTCTAAGACCGGACTACTCGGGTTTCTAATCCTGTTTGCTACCCACGCT2600.8675342008675343No Hit
ATTCTATCCGTGTGCCAGCCGCCGCGGTAATACGTAGGGTGCGAGCGTTA2520.8408408408408409No Hit
ATTCTATCCGTGTGTCAGCCGCCGCGGTAATACGGAAGGTCCAGGCGTTA2520.8408408408408409No Hit
TCTCTAAGACCGGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCT2410.8041374708041374No Hit
TCTCTAAGACCGGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCT2250.7507507507507507No Hit
TCTCTAAGACCGGACTACCGGGGTTTCTAATCCTGTTTGCTACCCACGCT2240.7474140807474141No Hit
ATTCTATCCGTGTGCCAGCAGCCGCGGTAATACGGAAGGTCCAGGCGTTA2220.7407407407407408No Hit
TCTCTAAGACCGGACTACTAGGGTTTCTAATCCTGTTTGCTACCCACGCT2050.6840173506840174No Hit
TCTCTAAGACCGGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCT2020.6740073406740074No Hit
ATTCTATCCGTGTGCCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTG1910.6373039706373039No Hit
TCTCTAAGACCGGACTACGAGGGTTTCTAATCCTGTTTGCTACCCACGCT1880.627293960627294No Hit
TCTCTAAGACCGGACTACAGGGGTTTCTAATCCTGTTTGCTACCCACGCT1840.6139472806139473No Hit
ATTCTATCCGTGTGTCAGCAGCCGCGGTAATACGTATGTCACGAGCGTTA1750.5839172505839173No Hit
TCTCTAAGACCGGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCT1730.5772439105772439No Hit
ATTCTATCCGTGTGTCAGCCGCCGCGGTAATACGGAGGGTGCGAGCGTTA1700.5672339005672339No Hit
TCTCTAAGACCGGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCT1690.5638972305638973No Hit
ATTCTATCCGTGTGTCAGCAGCCGCGGTAATACGGAGGATGCGAGCGTTA1690.5638972305638973No Hit
ATTCTATCCGTGTGTCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTA1660.5538872205538873No Hit
TCTCTAAGACCGGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCT1610.5372038705372039No Hit
ATTCTATCCGTGTGCCAGCAGCCGCGGTAATACGTAGGGCGCGAGCGTTG1610.5372038705372039No Hit
ATTCTATCCGTGTGTCAGCCGCCGCGGTAATACGTAGGGCGCGAGCGTTG1590.5305305305305306No Hit
ATTCTATCCGTGTGTCAGCAGCCGCGGTAATACGGGGGGTGCGAGCGTTA1530.5105105105105104No Hit
TCTCTAAGACCGGACTACCCGGGTTTCTAATCCTGTTTGCTACCCACGCT1520.5071738405071738No Hit
ATTCTATCCGTGTGCCAGCCGCCGCGGTAATACGGAAGGTCCAGGCGTTA1480.49382716049382713No Hit
ATTCTATCCGTGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTA1450.4838171504838172No Hit
TCTCTAAGACCGGACTACTGGGGTATCTAATCCTGTTTGCTACCCACGCT1390.4637971304637971No Hit
TCTCTAAGACCGGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCT1380.4604604604604604No Hit
ATTCTATCCGTGTGTCAGCAGCCGCGGTAATACGGAAGGTCCGGGCGTTA1380.4604604604604604No Hit
ATTCTATCCGTGTGTCAGCAGCCGCGGTAATACGTATGTCACAAGCGTTA1350.45045045045045046No Hit
TCTCTAAGACCGGACTACACGGGTTTCTAATCCTGTTTGCTACCCACGCT1300.43376710043376715No Hit
ATTCTATCCGTGTGTCAGCCGCCGCGGTAATACGGAGGATGCGAGCGTTA1260.42042042042042044No Hit
TCTCTAAGACCGGACTACCAGGGTTTCTAATCCTGTTTGCTACCCACGCT1250.41708375041708373No Hit
ATTCTATCCGTGTGTCAGCCGCCGCGGTAATACGTATGTCACGAGCGTTA1170.39039039039039036No Hit
TCTCTAAGACCGGACTACGGGGGTATCTAATCCTGTTTGCTACCCACGCT1130.3770437103770437No Hit
ATTCTATCCGTGTGCCAGCAGCCGCGGTAATACGTATGTCACGAGCGTTA1100.3670337003670337No Hit
TCTCTAAGACCGGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCT1090.36369703036369705No Hit
ATTCTATCCGTGTGCCAGCAGCCGCGGTAATACGGAGGATGCGAGCGTTA1050.35035035035035034No Hit
ATTCTATCCGTGTGTCAGCAGCCGCGGTAATACGGAGGATACGAGCGTTA1050.35035035035035034No Hit
TCTCTAAGACCGGACTACAAGGGTTTCTAATCCTGTTTGCTACCCACGCT1030.343677010343677No Hit
TCTCTAAGACCGGACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCT1020.34034034034034033No Hit
ATTCTATCCGTGTGTCAGCCGCCGCGGTAATACGTAGGGGGCAAGCGTTA1020.34034034034034033No Hit
TCTCTAAGACCGGACTACGGGGGTTTCTAATCCTGTTCGATACCCGCACC1000.333667000333667No Hit
TCTCTAAGACCGGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCT990.3303303303303303No Hit
TCTCTAAGACCGGACTACTGGGGTTTCTAATCCTGTTCGATACCCGCACC980.3269936603269937No Hit
ATTCTATCCGTGTGTCAGCCGCCGCGGTAATACGGAAGGTCCGGGCGTTA970.323656990323657No Hit
TCTCTAAGACCGGACTACTCGGGTATCTAATCCTGTTTGCTACCCACGCT960.3203203203203203No Hit
ATTCTATCCGTGTGTCAGCAGCCGCGGTAATACGTATGTCGCAAGCGTTA960.3203203203203203No Hit
ATTCTATCCGTGTGCCAGCAGCCGCGGTAATACGTATGTCACAAGCGTTA930.3103103103103103No Hit
ATTCTATCCGTGTGCCAGCCGCCGCGGTAATACGGAGGGTGCGAGCGTTA900.3003003003003003No Hit
ATTCTATCCGTGTGCCAGCAGCCGCGGTAATACGGGGGGTGCGAGCGTTA900.3003003003003003No Hit
ATTCTATCCGTGTGTCAGCCGCCGCGGTAATACGGGGGGTGCGAGCGTTA890.2969636302969636No Hit
ATTCTATCCGTGTGTCAGCCGCCGCGGTAATACGTATGTCACAAGCGTTA890.2969636302969636No Hit
TCTCTAAGACCGGACTACTCGGGTTTCTAATCCTGTTCGATACCCGCACC880.29362696029362695No Hit
TCTCTAAGACCGGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCT870.2902902902902903No Hit
ATTCTATCCGTGTGCCAGCAGCCGCGGTAATACGTATGTCGCAAGCGTTA870.2902902902902903No Hit
ATTCTATCCGTGTGCCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTA850.28361695028361694No Hit
TCTCTAAGACCGGACTACTGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT820.27360694027360694No Hit
ATTCTATCCGTGTGCCAGCAGCCGCGGTAATACGGAGGATACGAGCGTTA810.2702702702702703No Hit
ATTCTATCCGTGTGCCAGCCGCCGCGGTAATACGTAGGGCGCGAGCGTTG810.2702702702702703No Hit
ATTCTATCCGTGTGTCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA790.26359693026359693No Hit
TCTCTAAGACCGGACTACGCGGGTATCTAATCCTGTTTGCTACCCACGCT750.2502502502502503No Hit
TCTCTAAGACCGGACTACAGGGGTATCTAATCCTGTTTGCTACCCACGCT740.24691358024691357No Hit
ATTCTATCCGTGTGTCAGCCGCCGCGGTAATACGGAGGATACGAGCGTTA740.24691358024691357No Hit
TCTCTAAGACCGGACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCT720.24024024024024024No Hit
ATTCTATCCGTGTGTCAGCCGCCGCGGTAATACGTATGTCGCAAGCGTTA720.24024024024024024No Hit
ATTCTATCCGTGTGCCAGCAGCCGCGGTAATACGGAAGGTCCGGGCGTTA710.23690357023690356No Hit
TCTCTAAGACCGGACTACGAGGGTATCTAATCCTGTTTGCTACCCACGCT700.23356690023356688No Hit
TCTCTAAGACCGGACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCT690.2302302302302302No Hit
ATTCTATCCGTGTGTCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTA690.2302302302302302No Hit
ATTCTATCCGTGTGCCAGCCGCCGCGGTAATACGGAGGATGCGAGCGTTA690.2302302302302302No Hit
TCTCTAAGACCGGACTACTGGGGTTTCTAATCCTGTTCGCTCCCCATGCT680.22689356022689358No Hit
ATTCTATCCGTGTGCCAGCCGCCGCGGTAATACGTATGTCACAAGCGTTA660.22022022022022023No Hit
ATTCTATCCGTGTGTCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTA660.22022022022022023No Hit
TCTCTAAGACCGGACTACCGGGGTATCTAATCCTGTTTGCTACCCACGCT650.21688355021688357No Hit
TCTCTAAGACCGGACTACGCGGGTTTCTAATCCTGTTCGATACCCGCACC630.21021021021021022No Hit
TCTCTAAGACCGGACTACCGGGGTTTCTAATCCTGTTCGATACCCGCACC620.20687354020687354No Hit
ATTCTATCCGTGTGTCAGCAGCCGCGGTAATACGGAAGGTTCGGGCGTTA620.20687354020687354No Hit
ATTCTATCCGTGTGTCAGCAGCCGCGGTAATACGTATGTCGCGAGCGTTA610.20353687020353686No Hit
TCTCTAAGACCGGACTACTCGGGTTTCTAATCCTGTTCGCTCCCCATGCT600.20020020020020018No Hit
TCTCTAAGACCGGACTACCGGGGTTTCTAATCCTGTTCGCTCCCCATGCT580.19352686019352686No Hit
ATTCTATCCGTGTGCCAGCCGCCGCGGTAATACGTATGTCACGAGCGTTA580.19352686019352686No Hit
TCTCTAAGACCGGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCT560.18685352018685353No Hit
TCTCTAAGACCGGACTACTGGGGTTTCTAATCCTGTTTGATACCCGCACC550.18351685018351685No Hit
TCTCTAAGACCGGACTACTAGGGTATCTAATCCTGTTTGCTACCCACGCT500.1668335001668335No Hit
TCTCTAAGACCGGACTACTAGGGTTTCTAATCCTGTTCGATACCCGCACC490.16349683016349684No Hit
ATTCTATCCGTGTGCCAGCCGCCGCGGTAATACGTAGGGGGCAAGCGTTA490.16349683016349684No Hit
TCTCTAAGACCGGACTACGGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT490.16349683016349684No Hit
TCTCTAAGACCGGACTACTGGGGTTTCTAATCCTGTTTGATCCCCACGCT480.16016016016016016No Hit
TCTCTAAGACCGGACTACGGGGGTTTCTAATCCTGTTTGATACCCGCACC480.16016016016016016No Hit
TCTCTAAGACCGGACTACGAGGGTTTCTAATCCTGTTCGATACCCGCACC470.1568234901568235No Hit
ATTCTATCCGTGTGCCAGCCGCCGCGGTAATACGGAAGGTCCGGGCGTTA470.1568234901568235No Hit
TCTCTAAGACCGGACTACGGGGGTTTCTAATCCTGTTCGCTCCCCATGCT460.15348682015348683No Hit
TCTCTAAGACCGGACTACTGGGGTTTCTAATCCTGTTCGCTCCCCACGCT460.15348682015348683No Hit
ATTCTATCCGTGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA450.15015015015015015No Hit
TCTCTAAGACCGGACTACGCGGGTTTCTAATCCTGTTTGATACCCGCACC440.14681348014681347No Hit
TCTCTAAGACCGGACTACAAGGGTATCTAATCCTGTTTGCTACCCACGCT430.1434768101434768No Hit
TCTCTAAGACCGGACTACCCGGGTATCTAATCCTGTTTGCTACCCACGCT420.14014014014014012No Hit
TCTCTAAGACCGGACTACAGGGGTTTCTAATCCTGTTCGATACCCGCACC420.14014014014014012No Hit
TCTCTAAGACCGGACTACGCGGGTTTCTAATCCTGTTTGATCCCCACGCT410.13680347013680347No Hit
TCTCTAAGACCGGACTACCCGGGTTTCTAATCCTGTTCGATACCCGCACC410.13680347013680347No Hit
TCTCTAAGACCGGACTACCAGGGTATCTAATCCTGTTTGCTACCCACGCT410.13680347013680347No Hit
ATTCTATCCGTGTGCCAGCCGCCGCGGTAATACGGAGGATACGAGCGTTA410.13680347013680347No Hit
TCTCTAAGACCGGACTACTCGGGTTTCTAATCCCGTTCGCTCCCCTGGCT390.13013013013013014No Hit
TCTCTAAGACCGGACTACGGGGGTTTCTAATCCTGTTTGATCCCCACGCT390.13013013013013014No Hit
TCTCTAAGACCGGACTACTGGGGTATCTAATCCTGTTCGATACCCGCACC380.12679346012679346No Hit
ATTCTATCCGTGTGTCAGCAGCCGCGGTAATACGTAGGTGGCGAGCGTTG380.12679346012679346No Hit
TCTCTAAGACCGGACTACTAGGGTTTCTAATCCTGTTCGCTCCCCATGCT380.12679346012679346No Hit
TCTCTAAGACCGGACTACTGGGGTTTCTAATCCTGTTTGATACCCACGCT380.12679346012679346No Hit
TCTCTAAGACCGGACTACTCGGGTTTCTAATCCTGTTTGATACCCGCACC370.12345679012345678No Hit
TCTCTAAGACCGGACTACGAGGGTTTCTAATCCTGTTCGCTCCCCATGCT370.12345679012345678No Hit
ATTCTATCCGTGTGCCAGCCGCCGCGGTAATACGTATGTCGCAAGCGTTA370.12345679012345678No Hit
TCTCTAAGACCGGACTACACGGGTATCTAATCCTGTTTGCTACCCACGCT360.12012012012012012No Hit
TCTCTAAGACCGGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCTAGCT360.12012012012012012No Hit
TCTCTAAGACCGGACTACACGGGTTTCTAATCCTGTTCGATACCCGCACC360.12012012012012012No Hit
TCTCTAAGACCGGACTACCAGGGTTTCTAATCCTGTTCGATACCCGCACC350.11678345011678344No Hit
TCTCTAAGACCGGACTACGCGGGTTTCTAATCCCGTTCGCTCCCCTGGCT340.11344678011344679No Hit
ATTCTATCCGTGTGCCAGCCGCCGCGGTAATACGGGGGGTGCGAGCGTTA340.11344678011344679No Hit
ATTCTATCCGTGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTA340.11344678011344679No Hit
TCTCTAAGACCGGACTACGAGGGTTTCTAATCCTGTTTGATACCCGCACC340.11344678011344679No Hit
TCTCTAAGACCGGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCT340.11344678011344679No Hit
TCTCTAAGACCGGACTACTAGGGTTTCTAATCCTGTTCGCTCCCCACGCT330.11011011011011011No Hit
ATTCTATCCGTGTGTCAGCAGCCGCGGTAATACGGAGGGGGCAAGCGTTA330.11011011011011011No Hit
ATTCTATCCGTGTGTCAGCCGCCGCGGTAATACGTAGGTGGCGAGCGTTG330.11011011011011011No Hit
ATTCTATCCGTGTGCCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTA330.11011011011011011No Hit
ATTCTATCCGTGTGTCAGCAGCCGCGGTAATACAGAGGGTGCGAGCGTTA320.10677344010677345No Hit
TCTCTAAGACCGGACTACGGGGGTATCTAATCCTGTTCGATACCCGCACC320.10677344010677345No Hit
TCTCTAAGACCGGACTACCGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT320.10677344010677345No Hit
ATTCTATCCGTGTGTCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTA310.10343677010343677No Hit
TCTCTAAGACCGGACTACTCGGGTATCTAATCCTGTTCGATACCCGCACC310.10343677010343677No Hit
TCTCTAAGACCGGACTACCGGGGTTTCTAATCCTGTTTGATACCCGCACC310.10343677010343677No Hit
TCTCTAAGACCGGACTACGCGGGTTTCTAATCCTGTTCGCTCCCCACGCT300.10010010010010009No Hit
ATTCTATCCGTGTGTCAGCCGCCGCGGTAACACGTAAGGTGCGAGCGTTG300.10010010010010009No Hit
TCTCTAAGACCGGACTACGGGGGTTTCTAATCCTGTTTGATACCCACGCT300.10010010010010009No Hit
ATTCTATCCGTGTGTCAGCCGCCGCGGTAATACGTATGTCGCGAGCGTTA300.10010010010010009No Hit
TCTCTAAGACCGGACTACAGGGGTTTCTAATCCTGTTCGCTCCCCATGCT300.10010010010010009No Hit
ATTCTATCCGTGTGTCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTA300.10010010010010009No Hit
TCTCTAAGACCGGACTACTCGGGTTTCTAATCCTGTTCGCTCCCCACGCT300.10010010010010009No Hit
ATTCTATCCGTGTGTCAGCAGCCGCGGTAACACGTAAGGTGCGAGCGTTG300.10010010010010009No Hit
TCTCTAAGACCGGACTACGCGGGTTTCTAATCCTGTTCGCTCCCCATGCT300.10010010010010009No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)