FastQCFastQC Report
Sun 21 May 2023
EGAF00007847388

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007847388
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44100
Sequences flagged as poor quality0
Sequence length250
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTGAGCTAGTGTGTCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTG18954.297052154195011No Hit
TGTGAGCTAGTGTGTCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTG14853.36734693877551No Hit
TGTGAGCTAGTGTGTCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTA13082.9659863945578233No Hit
TGTGAGCTAGTGTGTCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTG11022.4988662131519273No Hit
TGTGAGCTAGTGTGTCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTA11012.496598639455782No Hit
TGTGAGCTAGTGTGCCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTG9852.233560090702948No Hit
TGTGAGCTAGTGTGTCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTG9402.131519274376417No Hit
TCATGCCTTCCGGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCT8041.82312925170068No Hit
TGTGAGCTAGTGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTG7581.7188208616780043No Hit
TCATGCCTTCCGGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCT6611.4988662131519275No Hit
TGTGAGCTAGTGTGCCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTA6591.4943310657596371No Hit
TGTGAGCTAGTGTGTCAGCCGCCGCGGTAATACGGAGGGTGCGAGCGTTA6531.4807256235827664No Hit
TCATGCCTTCCGGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCT6461.4648526077097506No Hit
TCATGCCTTCCGGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCT6461.4648526077097506No Hit
TGTGAGCTAGTGTGCCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTG6121.3877551020408163No Hit
TGTGAGCTAGTGTGTCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTA5391.2222222222222223No Hit
TCATGCCTTCCGGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCT5311.2040816326530612No Hit
TGTGAGCTAGTGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTA5281.1972789115646258No Hit
TGTGAGCTAGTGTGCCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTG4841.0975056689342404No Hit
TGTGAGCTAGTGTGTCAGCCGCCGCGGTAATACGTAGGGTGCGAGCGTTA4781.0839002267573696No Hit
TCATGCCTTCCGGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCT4180.9478458049886621No Hit
TGTGAGCTAGTGTGTCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTA3920.8888888888888888No Hit
TGTGAGCTAGTGTGCCAGCCGCCGCGGTAATACGGAGGGTGCGAGCGTTA3760.8526077097505669No Hit
TCATGCCTTCCGGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCT3760.8526077097505669No Hit
TCATGCCTTCCGGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCT3670.8321995464852608No Hit
TCATGCCTTCCGGACTACTGGGGTTTCTAATCCTGTTTGATCCCCACGCT3500.7936507936507936No Hit
TCATGCCTTCCGGACTACGGGGGTTTCTAATCCTGTTTGATCCCCACGCT3280.7437641723356009No Hit
TCATGCCTTCCGGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCT3240.7346938775510203No Hit
TGTGAGCTAGTGTGTCAGCCGCCGCGGTAATACGGAAGGTCCAGGCGTTA3130.709750566893424No Hit
TGTGAGCTAGTGTGTCAGCCGCCGCGGTAATACGTAGGGCGCGAGCGTTG3130.709750566893424No Hit
TGTGAGCTAGTGTGTCAGCAGCCGCGGTAATACGGAAGGTCCAGGCGTTA3030.6870748299319728No Hit
TCATGCCTTCCGGACTACCGGGGTTTCTAATCCTGTTTGATCCCCACGCT2980.6757369614512472No Hit
TCATGCCTTCCGGACTACTGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT2900.6575963718820862No Hit
TCATGCCTTCCGGACTACTCGGGTTTCTAATCCTGTTTGATCCCCACGCT2890.655328798185941No Hit
TGTGAGCTAGTGTGCCAGCCGCCGCGGTAATACGTAGGGTGCGAGCGTTA2870.6507936507936508No Hit
TCATGCCTTCCGGACTACTCGGGTTTCTAATCCTGTTTGCTACCCACGCT2860.6485260770975056No Hit
TCATGCCTTCCGGACTACGCGGGTTTCTAATCCTGTTTGATCCCCACGCT2840.6439909297052154No Hit
TGTGAGCTAGTGTGTCAGCCGCCGCGGTAATACGTAGGTCTCGAGCGTTG2800.6349206349206349No Hit
TCATGCCTTCCGGACTACGCGGGTTTCTAATCCCGTTCGCTCCCCTGGCT2790.6326530612244898No Hit
TCATGCCTTCCGGACTACGCGGGTTTCTAATCCTGTTTGCTACCCACGCT2760.6258503401360545No Hit
TGTGAGCTAGTGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTA2760.6258503401360545No Hit
TCATGCCTTCCGGACTACTGGGGTTTCTAATCCTGTTTGCTACCCACGCT2670.6054421768707483No Hit
TCATGCCTTCCGGACTACTCGGGTTTCTAATCCCGTTCGCTCCCCTGGCT2640.5986394557823129No Hit
TCATGCCTTCCGGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCT2630.5963718820861678No Hit
TCATGCCTTCCGGACTACGGGGGTTTCTAATCCTGTTTGCTACCCACGCT2610.5918367346938775No Hit
TCATGCCTTCCGGACTACCGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT2390.5419501133786848No Hit
TCATGCCTTCCGGACTACGGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT2370.5374149659863946No Hit
TCATGCCTTCCGGACTACCGGGGTTTCTAATCCTGTTTGCTACCCACGCT2360.5351473922902494No Hit
TGTGAGCTAGTGTGTCAGCAGCCGCGGTAATACGTAGGTCTCGAGCGTTG2330.528344671201814No Hit
TGTGAGCTAGTGTGTCAGCAGCCGCGGTAATACGTAGGGCGCGAGCGTTG2330.528344671201814No Hit
TCATGCCTTCCGGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCT2320.526077097505669No Hit
TCATGCCTTCCGGACTACGAGGGTTTCTAATCCTGTTTGCTACCCACGCT2070.4693877551020408No Hit
TCATGCCTTCCGGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCT2060.46712018140589573No Hit
TCATGCCTTCCGGACTACGAGGGTTTCTAATCCTGTTTGATCCCCACGCT2010.45578231292517No Hit
TGTGAGCTAGTGTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTA1950.44217687074829937No Hit
TCATGCCTTCCGGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCT1920.43537414965986393No Hit
TCATGCCTTCCGGACTACCCGGGTTTCTAATCCTGTTTGATCCCCACGCT1900.43083900226757366No Hit
TCATGCCTTCCGGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCT1840.4172335600907029No Hit
TGTGAGCTAGTGTGTCAGCCGCCGCGGTAATACGGAGGATGCGAGCGTTA1760.39909297052154197No Hit
TGTGAGCTAGTGTGCCAGCCGCCGCGGTAATACGGAAGGTCCAGGCGTTA1750.3968253968253968No Hit
TCATGCCTTCCGGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCT1690.3832199546485261No Hit
TCATGCCTTCCGGACTACGAGGGTTTCTAATCCCGTTCGCTCCCCTGGCT1680.38095238095238093No Hit
TCATGCCTTCCGGACTACTAGGGTTTCTAATCCTGTTTGATCCCCACGCT1680.38095238095238093No Hit
TCATGCCTTCCGGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCT1560.35374149659863946No Hit
TGTGAGCTAGTGTGTCAGCAGCCGCGGTAATACGGAAGGTCCGGGCGTTA1560.35374149659863946No Hit
TCATGCCTTCCGGACTACAGGGGTTTCTAATCCTGTTTGATCCCCACGCT1560.35374149659863946No Hit
TGTGAGCTAGTGTGCCAGCAGCCGCGGTAATACGGAAGGTCCAGGCGTTA1550.35147392290249435No Hit
TGTGAGCTAGTGTGTCAGCCGCCGCGGTAATACGTATGTCACAAGCGTTA1540.3492063492063492No Hit
TCATGCCTTCCGGACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCT1520.34467120181405897No Hit
TCATGCCTTCCGGACTACAGGGGTTTCTAATCCTGTTTGCTACCCACGCT1500.3401360544217687No Hit
TGTGAGCTAGTGTGCCAGCCGCCGCGGTAATACGTAGGTCTCGAGCGTTG1490.3378684807256236No Hit
TGTGAGCTAGTGTGTCAGCCGCCGCGGTAATACGTATGTCACGAGCGTTA1470.33333333333333337No Hit
TCATGCCTTCCGGACTACCCGGGTTTCTAATCCCGTTCGCTCCCCTGGCT1440.326530612244898No Hit
TCATGCCTTCCGGACTACCCGGGTTTCTAATCCTGTTTGCTACCCACGCT1430.3242630385487528No Hit
TGTGAGCTAGTGTGTCAGCCGCCGCGGTAATACGGAAGGTCCGGGCGTTA1400.31746031746031744No Hit
TCATGCCTTCCGGACTACAGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT1380.3129251700680272No Hit
TCATGCCTTCCGGACTACTAGGGTTTCTAATCCTGTTTGCTACCCACGCT1350.30612244897959184No Hit
TGTGAGCTAGTGTGCCAGCCGCCGCGGTAATACGTAGGGCGCGAGCGTTG1350.30612244897959184No Hit
TCATGCCTTCCGGACTACACGGGTTTCTAATCCTGTTTGATCCCCACGCT1340.3038548752834467No Hit
TGTGAGCTAGTGTGTCAGCCGCCGCGGTAATACGTAGGGGGCAAGCGTTA1270.28798185941043086No Hit
TGTGAGCTAGTGTGCCAGCAGCCGCGGTAATACGTAGGGCGCGAGCGTTG1230.2789115646258503No Hit
TCATGCCTTCCGGACTACTAGGGTTTCTAATCCCGTTCGCTCCCCTGGCT1220.2766439909297052No Hit
TGTGAGCTAGTGTGTCAGCAGCCGCGGTAATACGGAGGATGCGAGCGTTA1120.25396825396825395No Hit
TCATGCCTTCCGGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCT1120.25396825396825395No Hit
TGTGAGCTAGTGTGTCAGCCGCCGCGGTAATACGTATGTCGCAAGCGTTA1100.2494331065759637No Hit
TGTGAGCTAGTGTGCCAGCAGCCGCGGTAATACGTAGGTCTCGAGCGTTG1070.24263038548752833No Hit
TCATGCCTTCCGGACTACTGGGGTATCTAATCCTGTTTGATCCCCACGCT1020.23129251700680273No Hit
TCATGCCTTCCGGACTACACGGGTTTCTAATCCTGTTTGCTACCCACGCT1010.2290249433106576No Hit
TGTGAGCTAGTGTGTCAGCAGCCGCGGTAATACGTATGTCGCAAGCGTTA1000.22675736961451248No Hit
TCATGCCTTCCGGACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCT1000.22675736961451248No Hit
TGTGAGCTAGTGTGTCAGCAGCCGCGGTAATACGTATGTCACAAGCGTTA990.22448979591836735No Hit
TCATGCCTTCCGGACTACCAGGGTTTCTAATCCTGTTTGATCCCCACGCT950.21541950113378683No Hit
TCATGCCTTCCGGACTACCAGGGTTTCTAATCCTGTTTGCTACCCACGCT950.21541950113378683No Hit
TGTGAGCTAGTGTGTCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTA930.21088435374149658No Hit
TGTGAGCTAGTGTGTCAGCCGCCGCGGTAAGTTTTAATTTTTGTAGAGAA920.20861678004535145No Hit
TCATGCCTTCCGGACTACTCGGGTTTCTAATCCTGTTCGCTCCCCACGCT910.20634920634920637No Hit
TGTGAGCTAGTGTGTCAGCAGCCGCGGTAATACGTATGTCACGAGCGTTA880.19954648526077098No Hit
TCATGCCTTCCGGACTACGGGGGTTTCTAATCCTGTTCGCTCCCCACGCT850.1927437641723356No Hit
TCATGCCTTCCGGACTACTCGGGTATCTAATCCTGTTTGCTACCCACGCT850.1927437641723356No Hit
TCATGCCTTCCGGACTACACGGGTTTCTAATCCCGTTCGCTCCCCTGGCT850.1927437641723356No Hit
TCATGCCTTCCGGACTACGGGGGTATCTAATCCTGTTTGATCCCCACGCT840.19047619047619047No Hit
TCATGCCTTCCGGACTACCAGGGTTTCTAATCCCGTTCGCTCCCCTGGCT840.19047619047619047No Hit
TCATGCCTTCCGGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCT840.19047619047619047No Hit
TCATGCCTTCCGGACTACTGGGGTTTCTAATCCTGTTCGCTCCCCACGCT800.18140589569160998No Hit
TCATGCCTTCCGGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCT800.18140589569160998No Hit
TCATGCCTTCCGGACTACAAGGGTTTCTAATCCTGTTTGCTACCCACGCT800.18140589569160998No Hit
TCATGCCTTCCGGACTACGCGGGTATCTAATCCTGTTTGCTACCCACGCT790.17913832199546487No Hit
TGTGAGCTAGTGTGCCAGCCGCCGCGGTAATACGTATGTCACAAGCGTTA780.17687074829931973No Hit
TGTGAGCTAGTGTGCCAGCCGCCGCGGTAATACGTATGTCACGAGCGTTA780.17687074829931973No Hit
TCATGCCTTCCGGACTACCGGGGTATCTAATCCTGTTTGATCCCCACGCT780.17687074829931973No Hit
TCATGCCTTCCGGACTACTCGGGTATCTAATCCTGTTTGATCCCCACGCT770.1746031746031746No Hit
TGTGAGCTAGTGTGCCAGCCGCCGCGGTAATACGTAGGGGGCAAGCGTTA770.1746031746031746No Hit
TCATGCCTTCCGGACTACGCGGGTATCTAATCCTGTTTGATCCCCACGCT770.1746031746031746No Hit
TGTGAGCTAGTGTGCCAGCAGCCGCGGTAATACGGAAGGTCCGGGCGTTA760.17233560090702948No Hit
TGTGAGCTAGTGTGTCAGCAGCCGCGGTAAGTTTTAATTTTTGTAGAGAA750.17006802721088435No Hit
TCATGCCTTCCGGACTACTGGGGTATCTAATCCTGTTTGCTACCCACGCT740.1678004535147392No Hit
TGTGAGCTAGTGTGCCAGCAGCCGCGGTAATACGGAGGATGCGAGCGTTA740.1678004535147392No Hit
TCATGCCTTCCGGACTACTGGGGTATCTAATCCCGTTCGCTCCCCTGGCT730.1655328798185941No Hit
TGTGAGCTAGTGTGCCAGCCGCCGCGGTAATACGGAGGATGCGAGCGTTA720.163265306122449No Hit
TCATGCCTTCCGGACTACTGGGGTTTCTAATCCTGTTTGATACCCGCACC720.163265306122449No Hit
TGTGAGCTAGTGTGTCAGCCGCCGCGGTAATACGGAGGGTGCAAGCGTTA700.15873015873015872No Hit
TCATGCCTTCCGGACTACAAGGGTTTCTAATCCTGTTTGATCCCCACGCT700.15873015873015872No Hit
TGTGAGCTAGTGTGCCAGCCGCCGCGGTAATACGTATGTCGCAAGCGTTA680.15419501133786848No Hit
TCATGCCTTCCGGACTACGCGGGTTTCTAATCCTGTTCGCTCCCCACGCT670.15192743764172334No Hit
TCATGCCTTCCGGACTACCGGGGTATCTAATCCTGTTTGCTACCCACGCT670.15192743764172334No Hit
TGTGAGCTAGTGTGCCAGCCGCCGCGGTAATACGGAAGGTCCGGGCGTTA670.15192743764172334No Hit
TCATGCCTTCCGGACTACGGGGGTATCTAATCCCGTTCGCTCCCCTGGCT660.14965986394557823No Hit
TGTGAGCTAGTGTGCCAGCAGCCGCGGTAATACGTATGTCACGAGCGTTA660.14965986394557823No Hit
TCATGCCTTCCGGACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCT660.14965986394557823No Hit
TCATGCCTTCCGGACTACGGGGGTATCTAATCCTGTTTGCTACCCACGCT650.14739229024943312No Hit
TCATGCCTTCCGGACTACTCGGGTTTCTAATCCTGTTCGATACCCGCACC650.14739229024943312No Hit
TCATGCCTTCCGGACTACTGGGGTTTCTAATCCTGTTCGATACCCGCACC640.14512471655328799No Hit
TGTGAGCTAGTGTGTCAGCAGCCGCGGTAATACGGGGGGTGCGAGCGTTA630.14285714285714285No Hit
TCATGCCTTCCGGACTACGCGGGTTTCTAATCCTGTTCGCTCCCCATGCT630.14285714285714285No Hit
TCATGCCTTCCGGACTACCGGGGTATCTAATCCCGTTCGCTCCCCTGGCT620.14058956916099774No Hit
TCATGCCTTCCGGACTACCCGGGTTTCTAATCCTGTTCGCTCCCCACGCT620.14058956916099774No Hit
TCATGCCTTCCGGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCTAGCT620.14058956916099774No Hit
TCATGCCTTCCGGACTACGCGGGTATCTAATCCCGTTCGCTCCCCTGGCT610.1383219954648526No Hit
TGTGAGCTAGTGTGCCAGCAGCCGCGGTAATACGTATGTCGCAAGCGTTA600.13605442176870747No Hit
TGTGAGCTAGTGTGTCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTA600.13605442176870747No Hit
TCATGCCTTCCGGACTACGAGGGTTTCTAATCCTGTTCGCTCCCCACGCT590.13378684807256236No Hit
TCATGCCTTCCGGACTACTCGGGTATCTAATCCCGTTCGCTCCCCTGGCT580.13151927437641725No Hit
TCATGCCTTCCGGACTACTGGGGTTTCTAATCCTGTTCGCTCCCCATGCT570.1292517006802721No Hit
TGTGAGCTAGTGTGCCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTA570.1292517006802721No Hit
TCATGCCTTCCGGACTACCGGGGTTTCTAATCCTGTTCGCTCCCCACGCT570.1292517006802721No Hit
TCATGCCTTCCGGACTACGAGGGTATCTAATCCTGTTTGATCCCCACGCT560.12698412698412698No Hit
TCATGCCTTCCGGACTACTCGGGTTTCTAATCCTGTTTGATACCCGCACC550.12471655328798185No Hit
TCATGCCTTCCGGACTACGCGGGTTTCTAATCCTGTTCGATACCCGCACC540.12244897959183673No Hit
TCATGCCTTCCGGACTACAAGGGTTTCTAATCCCGTTCGCTCCCCTGGCT520.1179138321995465No Hit
TCATGCCTTCCGGACTACGGGGGTTTCTAATCCTGTTCGATACCCGCACC510.11564625850340136No Hit
TCATGCCTTCCGGACTACGGGGGTTTCTAATCCTGTTCGCTCCCCATGCT510.11564625850340136No Hit
TGTGAGCTAGTGTGTCAGCAGCCGCGGTAATACGGAGGATACGAGCGTTA500.11337868480725624No Hit
TGTGAGCTAGTGTGCCAGCAGCCGCGGTAATACGTATGTCACAAGCGTTA500.11337868480725624No Hit
TCATGCCTTCCGGACTACGGGGGTTTCTAATCCTGTTTGATACCCGCACC500.11337868480725624No Hit
TGTGAGCTAGTGTGTCAGCCGCCGCGGTAATACGGAAGGTTCGGGCGTTA500.11337868480725624No Hit
TGTGAGCTAGTGTGTCAGCCGCCGCGGTAATACGGAGGATACGAGCGTTA500.11337868480725624No Hit
TCATGCCTTCCGGACTACCGGGGTTTCTAATCCTGTTCGATACCCGCACC490.1111111111111111No Hit
TCATGCCTTCCGGACTACCCGGGTATCTAATCCTGTTTGATCCCCACGCT480.10884353741496598No Hit
TGTGAGCTAGTGTGTCAGCCGCCGCGGTAATACGGGGGGTGCGAGCGTTA470.10657596371882086No Hit
TCATGCCTTCCGGACTACAGGGGTATCTAATCCTGTTTGCTACCCACGCT470.10657596371882086No Hit
TGTGAGCTAGTGTGTCAGCCGCCGCGGTAATACGTAGGTGGCGAGCGTTA470.10657596371882086No Hit
TGTGAGCTAGTGTGTCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTA460.10430839002267572No Hit
TCATGCCTTCCGGACTACCCGGGTATCTAATCCTGTTTGCTACCCACGCT460.10430839002267572No Hit
TCATGCCTTCCGGACTACGCGGGTTTCTAATCCTGTTTGATACCCGCACC460.10430839002267572No Hit
TGTGAGCTAGTGTGTCAGCCGCCGCGGTAATACGTAGGTGGCGAGCGTTG460.10430839002267572No Hit
TCATGCCTTCCGGACTACGAGGGTTTCTAATCCTGTTCGATACCCGCACC460.10430839002267572No Hit
TGTGAGCTAGTGTGTCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTA460.10430839002267572No Hit

[OK]Adapter Content

Adapter graph