FastQCFastQC Report
Sun 21 May 2023
EGAF00007847981

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007847981
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences52840
Sequences flagged as poor quality0
Sequence length250
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTTGCTGAGTGTGTCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTA20443.8682816048448143No Hit
ACTTGCTGAGTGTGTCAGCCGCCGCGGTAATACGTAGGGTGCGAGCGTTA19553.6998485995457986No Hit
ACTTGCTGAGTGTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTA14182.683573050719152No Hit
ACTTGCTGAGTGTGCCAGCCGCCGCGGTAATACGTAGGGTGCGAGCGTTA13832.617335352006056No Hit
ACTTGCTGAGTGTGTCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTG9801.854655563966692No Hit
TCGGAAGGCCCGGACTACGGGGGTTTCTAATCCTGTTTGCTACCCACGCT9441.7865253595760788No Hit
ACTTGCTGAGTGTGTCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTG8701.6464799394398182No Hit
TCGGAAGGCCCGGACTACTGGGGTTTCTAATCCTGTTTGCTACCCACGCT7901.4950794852384557No Hit
TCGGAAGGCCCGGACTACGCGGGTTTCTAATCCTGTTTGCTACCCACGCT7271.3758516275548827No Hit
TCGGAAGGCCCGGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCT7071.338001514004542No Hit
ACTTGCTGAGTGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTG6431.2168811506434518No Hit
ACTTGCTGAGTGTGTCAGCAGCCGCGGTAATACGGAAGGTCCAGGCGTTA6261.1847085541256623No Hit
TCGGAAGGCCCGGACTACTCGGGTTTCTAATCCTGTTTGCTACCCACGCT6181.169568508705526No Hit
ACTTGCTGAGTGTGCCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTG5881.112793338380015No Hit
ACTTGCTGAGTGTGTCAGCCGCCGCGGTAATACGGAAGGTCCAGGCGTTA5601.0598031794095382No Hit
TCGGAAGGCCCGGACTACGAGGGTTTCTAATCCTGTTTGCTACCCACGCT5561.05223315669947No Hit
TCGGAAGGCCCGGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCT5501.040878122634368No Hit
TCGGAAGGCCCGGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCT5351.0124905374716124No Hit
TCGGAAGGCCCGGACTACCGGGGTTTCTAATCCTGTTTGCTACCCACGCT4940.9348978046934141No Hit
ACTTGCTGAGTGTGTCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTA4880.9235427706283119No Hit
ACTTGCTGAGTGTGTCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTG4880.9235427706283119No Hit
TCGGAAGGCCCGGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCT4820.9121877365632096No Hit
ACTTGCTGAGTGTGTCAGCCGCCGCGGTAATACGGAGGGTGCGAGCGTTA4560.8629825889477669No Hit
TCGGAAGGCCCGGACTACCAGGGTTTCTAATCCTGTTTGCTACCCACGCT4530.8573050719152157No Hit
TCGGAAGGCCCGGACTACTAGGGTTTCTAATCCTGTTTGCTACCCACGCT4520.8554125662376988No Hit
TCGGAAGGCCCGGACTACAGGGGTTTCTAATCCTGTTTGCTACCCACGCT4440.8402725208175624No Hit
TCGGAAGGCCCGGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCT4420.8364875094625284No Hit
ACTTGCTGAGTGTGTCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTG4240.8024224072672219No Hit
TCGGAAGGCCCGGACTACGGGGGTATCTAATCCTGTTTGCTACCCACGCT4230.8005299015897048No Hit
TCGGAAGGCCCGGACTACCCGGGTTTCTAATCCTGTTTGCTACCCACGCT4170.7891748675246026No Hit
TCGGAAGGCCCGGACTACTGGGGTATCTAATCCTGTTTGCTACCCACGCT3960.7494322482967449No Hit
ACTTGCTGAGTGTGCCAGCCGCCGCGGTAATACGGAAGGTCCAGGCGTTA3870.7323996971990916No Hit
TCGGAAGGCCCGGACTACGAGGGTATCTAATCCTGTTTGCTACCCACGCT3780.7153671461014384No Hit
ACTTGCTGAGTGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTA3720.7040121120363362No Hit
ACTTGCTGAGTGTGTCAGCAGCCGCGGTAATACGGAGGATGCGAGCGTTA3580.6775170325510976No Hit
ACTTGCTGAGTGTGCCAGCAGCCGCGGTAATACGGAAGGTCCAGGCGTTA3490.6604844814534444No Hit
ACTTGCTGAGTGTGCCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTG3460.6548069644208933No Hit
ACTTGCTGAGTGTGTCAGCAGCCGCGGTAATACGTAGGGCGCGAGCGTTG3400.6434519303557911No Hit
TCGGAAGGCCCGGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCT3380.639666919000757No Hit
ACTTGCTGAGTGTGTCAGCAGCCGCGGTAATACGTATGTCACAAGCGTTA3370.6377744133232399No Hit
TCGGAAGGCCCGGACTACACGGGTTTCTAATCCTGTTTGCTACCCACGCT3340.6320968962906889No Hit
TCGGAAGGCCCGGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCT3310.6264193792581377No Hit
TCGGAAGGCCCGGACTACGCGGGTATCTAATCCTGTTTGCTACCCACGCT3250.6150643451930355No Hit
TCGGAAGGCCCGGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCT3240.6131718395155186No Hit
TCGGAAGGCCCGGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCT3180.6018168054504164No Hit
ACTTGCTGAGTGTGTCAGCCGCCGCGGTAATACGGAGGATGCGAGCGTTA3090.584784254352763No Hit
TCGGAAGGCCCGGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCT3050.5772142316426949No Hit
ACTTGCTGAGTGTGCCAGCCGCCGCGGTAATACGGAGGGTGCGAGCGTTA3050.5772142316426949No Hit
TCGGAAGGCCCGGACTACAAGGGTTTCTAATCCTGTTTGCTACCCACGCT3030.5734292202876609No Hit
ACTTGCTGAGTGTGCCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTG2930.5545041635124905No Hit
TCGGAAGGCCCGGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCT2900.5488266464799395No Hit
ACTTGCTGAGTGTGTCAGCCGCCGCGGTAATACGTAGGGCGCGAGCGTTG2800.5299015897047691No Hit
ACTTGCTGAGTGTGTCAGCCGCCGCGGTAATACGTATGTCACAAGCGTTA2770.524224072672218No Hit
TCGGAAGGCCCGGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCT2770.524224072672218No Hit
TCGGAAGGCCCGGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCT2640.4996214988644966No Hit
TCGGAAGGCCCGGACTACTCGGGTATCTAATCCTGTTTGCTACCCACGCT2520.47691143073429226No Hit
TCGGAAGGCCCGGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCT2520.47691143073429226No Hit
ACTTGCTGAGTGTGTCAGCAGCCGCGGTAATACGGAAGGTCCGGGCGTTA2510.4750189250567752No Hit
TCGGAAGGCCCGGACTACCGGGGTATCTAATCCTGTTTGCTACCCACGCT2380.4504163512490537No Hit
ACTTGCTGAGTGTGTCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTA2370.44852384557153674No Hit
TCGGAAGGCCCGGACTACCAGGGTATCTAATCCTGTTTGCTACCCACGCT2320.4390613171839515No Hit
TCGGAAGGCCCGGACTACTAGGGTATCTAATCCTGTTTGCTACCCACGCT2310.43716881150643455No Hit
TCGGAAGGCCCGGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCT2240.4239212717638153No Hit
ACTTGCTGAGTGTGCCAGCAGCCGCGGTAATACGTAGGGCGCGAGCGTTG2210.4182437547312642No Hit
TCGGAAGGCCCGGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCT2210.4182437547312642No Hit
ACTTGCTGAGTGTGCCAGCCGCCGCGGTAATACGTATGTCACAAGCGTTA2210.4182437547312642No Hit
TCGGAAGGCCCGGACTACAGGGGTATCTAATCCTGTTTGCTACCCACGCT2160.408781226343679No Hit
TCGGAAGGCCCGGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCT2060.3898561695685087No Hit
ACTTGCTGAGTGTGCCAGCAGCCGCGGTAATACGTATGTCACAAGCGTTA2040.38607115821347465No Hit
ACTTGCTGAGTGTGTCAGCCGCCGCGGTAATACGGAAGGTCCGGGCGTTA2010.38039364118092356No Hit
ACTTGCTGAGTGTGTCAGCCGCCGCGGTAATACGTATGTCACGAGCGTTA2010.38039364118092356No Hit
ACTTGCTGAGTGTGTCAGCAGCCGCGGTAATACGTATGTCACGAGCGTTA1930.3652535957607873No Hit
TCGGAAGGCCCGGACTACCCGGGTATCTAATCCTGTTTGCTACCCACGCT1920.3633610900832702No Hit
TCGGAAGGCCCGGACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCT1910.3614685844057532No Hit
ACTTGCTGAGTGTGCCAGCCGCCGCGGTAATACGGAGGATGCGAGCGTTA1880.3557910673732021No Hit
ACTTGCTGAGTGTGCCAGCAGCCGCGGTAATACGGAGGATGCGAGCGTTA1870.35389856169568507No Hit
ACTTGCTGAGTGTGTCAGCCGCCGCGGTAATACGTAGGGGGCAAGCGTTA1830.34632853898561694No Hit
ACTTGCTGAGTGTGCCAGCAGCCGCGGTAATACGTATGTCACGAGCGTTA1720.3255109765329296No Hit
ACTTGCTGAGTGTGTCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTA1720.3255109765329296No Hit
ACTTGCTGAGTGTGCCAGCCGCCGCGGTAATACGTAGGGCGCGAGCGTTG1700.32172596517789553No Hit
TCGGAAGGCCCGGACTACACGGGTATCTAATCCTGTTTGCTACCCACGCT1690.3198334595003785No Hit
TCGGAAGGCCCGGACTACGGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT1660.3141559424678274No Hit
TCGGAAGGCCCGGACTACTGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT1590.3009084027252082No Hit
ACTTGCTGAGTGTGTCAGCCGCCGCGGTAATACGGAGGGTGCAAGCGTTA1580.29901589704769116No Hit
ACTTGCTGAGTGTGCCAGCAGCCGCGGTAATACGGAAGGTCCGGGCGTTA1560.2952308856926571No Hit
ACTTGCTGAGTGTGTCAGCAGCCGCGGTAATACGGGGGGTGCGAGCGTTA1560.2952308856926571No Hit
ACTTGCTGAGTGTGCCAGCCGCCGCGGTAATACGTATGTCACGAGCGTTA1530.289553368660106No Hit
TCGGAAGGCCCGGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCT1510.2857683573050719No Hit
TCGGAAGGCCCGGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCT1500.2838758516275549No Hit
ACTTGCTGAGTGTGCCAGCCGCCGCGGTAATACGTAGGGGGCAAGCGTTA1460.2763058289174868No Hit
TCGGAAGGCCCGGACTACAAGGGTATCTAATCCTGTTTGCTACCCACGCT1440.27252081756245267No Hit
TCGGAAGGCCCGGACTACGGGGGTTTCTAATCCTGTTCGATACCCGCACC1430.27062831188493564No Hit
TCGGAAGGCCCGGACTACTGGGGTTTCTAATCCTGTTCGATACCCGCACC1410.2668433005299016No Hit
TCGGAAGGCCCGGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCT1390.2630582891748675No Hit
ACTTGCTGAGTGTGTCAGCCGCCGCGGTAATACGGGGGGTGCGAGCGTTA1350.2554882664647994No Hit
TCGGAAGGCCCGGACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCT1290.2441332323996972No Hit
ACTTGCTGAGTGTGCCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTA1290.2441332323996972No Hit
TCGGAAGGCCCGGACTACGAGGGTTTCTAATCCCGTTCGCTCCCCTGGCT1280.24224072672218017No Hit
TCGGAAGGCCCGGACTACGCGGGTTTCTAATCCCGTTCGCTCCCCTGGCT1230.23277819833459498No Hit
ACTTGCTGAGTGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTA1210.22899318697956095No Hit
TCGGAAGGCCCGGACTACTCGGGTTTCTAATCCCGTTCGCTCCCCTGGCT1200.22710068130204392No Hit
ACTTGCTGAGTGTGTCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA1170.22142316426949282No Hit
ACTTGCTGAGTGTGCCAGCCGCCGCGGTAATACGGAAGGTCCGGGCGTTA1150.21763815291445873No Hit
ACTTGCTGAGTGTGTCAGCAGCCGCGGTAATACGTATGTCGCGAGCGTTA1140.21574564723694173No Hit
TCGGAAGGCCCGGACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCT1100.2081756245268736No Hit
ACTTGCTGAGTGTGTCAGCAGCCGCGGTAATACGGAGGATACGAGCGTTA1040.1968205904617714No Hit
ACTTGCTGAGTGTGCCAGCAGCCGCGGTAATACGGGGGGTGCGAGCGTTA1010.1911430734292203No Hit
ACTTGCTGAGTGTGTCAGCCGCCGCGGTAATACGTATGTCGCGAGCGTTA990.18735806207418623No Hit
ACTTGCTGAGTGTGTCAGCCGCCGCGGTAATACGTAGGGGGCTAGCGTTA970.18357305071915217No Hit
TCGGAAGGCCCGGACTACGCGGGTTTCTAATCCTGTTCGATACCCGCACC950.1797880393641181No Hit
ACTTGCTGAGTGTGCCAGCCGCCGCGGTAATACGGAGGGTGCAAGCGTTA950.1797880393641181No Hit
ACTTGCTGAGTGTGTCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTA940.17789553368660105No Hit
TCGGAAGGCCCGGACTACCAGGGTTTCTAATCCCGTTCGCTCCCCTGGCT920.17411052233156699No Hit
ACTTGCTGAGTGTGTCAGCCGCCGCGGTAATACGGAGGATACGAGCGTTA900.17032551097653292No Hit
TCGGAAGGCCCGGACTACCGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT880.16654049962149886No Hit
TCGGAAGGCCCGGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCT870.16464799394398183No Hit
TCGGAAGGCCCGGACTACTGGGGTTTCTAATCCTGTTTGATACCCACGCT850.16086298258894777No Hit
TCGGAAGGCCCGGACTACTCGGGTTTCTAATCCTGTTCGATACCCGCACC840.15897047691143074No Hit
ACTTGCTGAGTGTGCCAGCCGCCGCGGTAATACGGGGGGTGCGAGCGTTA830.1570779712339137No Hit
TCGGAAGGCCCGGACTACTGGGGTTTCTAATCCTGTTCGCTCCCCATGCT830.1570779712339137No Hit
TCGGAAGGCCCGGACTACGGGGGTTTCTAATCCTGTTCGCTCCCCATGCT810.15329295987887964No Hit
TCGGAAGGCCCGGACTACAGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT810.15329295987887964No Hit
ACTTGCTGAGTGTGTCAGCAGCCGCGGTAATACGTAGGTGGCGAGCGTTG790.14950794852384558No Hit
ACTTGCTGAGTGTGCCAGCCGCCGCGGTAATACGTAGGGGGCTAGCGTTA760.14383043149129449No Hit
TCGGAAGGCCCGGACTACTAGGGTTTCTAATCCCGTTCGCTCCCCTGGCT760.14383043149129449No Hit
TCGGAAGGCCCGGACTACTGGGGTATCTAATCCCGTTCGCTCCCCTGGCT760.14383043149129449No Hit
TCGGAAGGCCCGGACTACGGGGGTATCTAATCCCGTTCGCTCCCCTGGCT740.1400454201362604No Hit
ACTTGCTGAGTGTGTCAGCCGCCGCGGTAATACGTAGGGTGCAAGCGTTA740.1400454201362604No Hit
TCGGAAGGCCCGGACTACGAGGGTTTCTAATCCTGTTCGCTCCCCATGCT740.1400454201362604No Hit
ACTTGCTGAGTGTGCCAGCCGCCGCGGTAATACGTAGGGTGCAAGCGTTA730.1381529144587434No Hit
TCGGAAGGCCCGGACTACCCGGGTTTCTAATCCTGTTCGATACCCGCACC720.13626040878122633No Hit
TCGGAAGGCCCGGACTACACGGGTTTCTAATCCCGTTCGCTCCCCTGGCT720.13626040878122633No Hit
TCGGAAGGCCCGGACTACCCGGGTTTCTAATCCCGTTCGCTCCCCTGGCT700.13247539742619227No Hit
TCGGAAGGCCCGGACTACGAGGGTTTCTAATCCTGTTTGATACCCACGCT690.13058289174867527No Hit
ACTTGCTGAGTGTGCCAGCAGCCGCGGTAATACGGAGGATACGAGCGTTA680.1286903860711582No Hit
TCGGAAGGCCCGGACTACTCGGGTTTCTAATCCTGTTCGCTCCCCATGCT660.12490537471612415No Hit
TCGGAAGGCCCGGACTACGCGGGTTTCTAATCCTGTTCGCTCCCCATGCT660.12490537471612415No Hit
TCGGAAGGCCCGGACTACGCGGGTTTCTAATCCTGTTTGATACCCACGCT640.12112036336109008No Hit
ACTTGCTGAGTGTGTCAGCCGCCGCGGTAATACGTATGTCGCAAGCGTTA640.12112036336109008No Hit
ACTTGCTGAGTGTGCCAGCCGCCGCGGTAATACGGAGGATACGAGCGTTA640.12112036336109008No Hit
ACTTGCTGAGTGTGCCAGCAGCCGCGGTAATACGTATGTCGCGAGCGTTA640.12112036336109008No Hit
ACTTGCTGAGTGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTA640.12112036336109008No Hit
ACTTGCTGAGTGTGTCAGCCGCCGCGGTAATACGTAGGTGGCGAGCGTTG640.12112036336109008No Hit
TCGGAAGGCCCGGACTACGAGGGTTTCTAATCCTGTTCGATACCCGCACC630.11922785768357307No Hit
TCGGAAGGCCCGGACTACTAGGGTTTCTAATCCTGTTCGATACCCGCACC620.11733535200605602No Hit
TCGGAAGGCCCGGACTACGGGGGTTTCTAATCCTGTTTGATACCCACGCT620.11733535200605602No Hit
TCGGAAGGCCCGGACTACCGGGGTTTCTAATCCTGTTCGATACCCGCACC620.11733535200605602No Hit
TCGGAAGGCCCGGACTACAGGGGTTTCTAATCCTGTTCGATACCCGCACC620.11733535200605602No Hit
ACTTGCTGAGTGTGCCAGCCGCCGCGGTAATACGTATGTCGCGAGCGTTA620.11733535200605602No Hit
TCGGAAGGCCCGGACTACGCGGGTATCTAATCCCGTTCGCTCCCCTGGCT610.11544284632853899No Hit
TCGGAAGGCCCGGACTACTCGGGTTTCTAATCCTGTTTGATACCCACGCT610.11544284632853899No Hit
TCGGAAGGCCCGGACTACTGGGGTTTCTAATCCTGTTCGCTCCCCACGCT600.11355034065102196No Hit
TCGGAAGGCCCGGACTACAAGGGTTTCTAATCCCGTTCGCTCCCCTGGCT600.11355034065102196No Hit
ACTTGCTGAGTGTGTCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTA580.10976532929598788No Hit
ACTTGCTGAGTGTGTCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTA580.10976532929598788No Hit
TCGGAAGGCCCGGACTACCAGGGTTTCTAATCCTGTTCGATACCCGCACC580.10976532929598788No Hit
TCGGAAGGCCCGGACTACGGGGGTATCTAATCCTGTTCGATACCCGCACC580.10976532929598788No Hit
TCGGAAGGCCCGGACTACTCGGGTATCTAATCCCGTTCGCTCCCCTGGCT560.10598031794095382No Hit
ACTTGCTGAGTGTGTCAGCAGCCGCGGTAACACGTAAGGGGCGAGCGTTG550.1040878122634368No Hit
TCGGAAGGCCCGGACTACGGGGGTTTCTAATCCTGTTCGCTCCCCACGCT550.1040878122634368No Hit
ACTTGCTGAGTGTGTCAGCCGCCGCGGTAACACGTAAGGGGCGAGCGTTG540.10219530658591976No Hit
ACTTGCTGAGTGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA540.10219530658591976No Hit
ACTTGCTGAGTGTGTCAGCAGCCGCGGTAATACGTATGTCGCAAGCGTTA540.10219530658591976No Hit
TCGGAAGGCCCGGACTACGAGGGTATCTAATCCCGTTCGCTCCCCTGGCT530.10030280090840274No Hit
TCGGAAGGCCCGGACTACCGGGGTTTCTAATCCTGTTCGCTCCCCATGCT530.10030280090840274No Hit

[OK]Adapter Content

Adapter graph