FastQCFastQC Report
Sun 21 May 2023
EGAF00007848154

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007848154
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54497
Sequences flagged as poor quality0
Sequence length250
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATACACCACGTGTGTCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTA23274.269959814301705No Hit
ATACACCACGTGTGTCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTG19253.532304530524616No Hit
ATACACCACGTGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTA17383.189166376130796No Hit
ATACACCACGTGTGTCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTA16413.011174927060205No Hit
ATACACCACGTGTGCCAGCAGCCGCGGTAATACGTAGGTCCCGAGCGTTG15682.877222599409142No Hit
ATACACCACGTGTGTCAGCCGCCGCGGTAATACGGAGGGTGCGAGCGTTA13302.4405013119988257No Hit
ATACACCACGTGTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTA13242.4294915316439436No Hit
TGTGCCTGTCCGGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCT12302.257004972750794No Hit
ATACACCACGTGTGTCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTG11412.0936932308200453No Hit
TGTGCCTGTCCGGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCT10631.9505660862065801No Hit
TGTGCCTGTCCGGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCT10061.8459731728352018No Hit
TGTGCCTGTCCGGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCT9931.8221186487329577No Hit
ATACACCACGTGTGCCAGCCGCCGCGGTAATACGGAGGGTGCGAGCGTTA9821.8019340514156743No Hit
ATACACCACGTGTGTCAGCCGCCGCGGTAATACGTAGGGTGCGAGCGTTA9801.7982641246307134No Hit
ATACACCACGTGTGCCAGCCGCCGCGGTAATACGTAGGTCCCGAGCGTTG7771.4257665559572086No Hit
TGTGCCTGTCCGGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCT7701.4129218122098464No Hit
ATACACCACGTGTGCCAGCCGCCGCGGTAATACGTAGGGTGCGAGCGTTA7331.3450281666880746No Hit
TGTGCCTGTCCGGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCT7241.3285134961557516No Hit
ATACACCACGTGTGTCAGCAGCCGCGGTAATACGGAAGGTCCAGGCGTTA6141.1266675229829164No Hit
TGTGCCTGTCCGGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCT6051.1101528524505937No Hit
TGTGCCTGTCCGGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCT6001.100978035488192No Hit
TGTGCCTGTCCGGACTACGCGGGTTTCTAATCCTGTTTGCTACCCACGCT5921.0862983283483496No Hit
ATACACCACGTGTGTCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTG5661.038589280143861No Hit
TGTGCCTGTCCGGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCT5561.020239646219058No Hit
TGTGCCTGTCCGGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCT5451.0000550489017743No Hit
TGTGCCTGTCCGGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCT5410.9927151953318533No Hit
TGTGCCTGTCCGGACTACGGGGGTTTCTAATCCTGTTTGCTACCCACGCT5180.9505110373048058No Hit
TGTGCCTGTCCGGACTACCGGGGTTTCTAATCCTGTTTGCTACCCACGCT5150.9450061471273647No Hit
TGTGCCTGTCCGGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCT5030.9229865864176009No Hit
TGTGCCTGTCCGGACTACCCGGGTTTCTAATCCTGTTTGCTACCCACGCT4860.8917922087454354No Hit
ATACACCACGTGTGCCAGCAGCCGCGGTAATACGGAAGGTCCAGGCGTTA4690.86059783107327No Hit
ATACACCACGTGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTG4680.8587628676807898No Hit
TGTGCCTGTCCGGACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCT4670.8569279042883093No Hit
TGTGCCTGTCCGGACTACGAGGGTTTCTAATCCTGTTTGCTACCCACGCT3930.7211406132447657No Hit
TGTGCCTGTCCGGACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCT3800.6972860891425215No Hit
TGTGCCTGTCCGGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCT3700.6789364552177184No Hit
TGTGCCTGTCCGGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCT3630.6660917114703562No Hit
ATACACCACGTGTGTCAGCAGCCGCGGTAATACGGAGGATGCGAGCGTTA3560.653246967722994No Hit
ATACACCACGTGTGTCAGCCGCCGCGGTAATACGGAAGGTCCAGGCGTTA3500.642237187368112No Hit
TGTGCCTGTCCGGACTACTCGGGTTTCTAATCCTGTTTGCTACCCACGCT3480.6385672605831514No Hit
ATACACCACGTGTGTCAGCAGCCGCGGTAATACGTATGTCACAAGCGTTA3460.6348973337981907No Hit
TGTGCCTGTCCGGACTACTGGGGTTTCTAATCCTGTTTGCTACCCACGCT3450.6330623704057103No Hit
ATACACCACGTGTGTCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTG3370.6183826632658679No Hit
TGTGCCTGTCCGGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCT3290.6037029561260253No Hit
TGTGCCTGTCCGGACTACAGGGGTTTCTAATCCTGTTTGCTACCCACGCT3090.5670036882764189No Hit
TGTGCCTGTCCGGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCT2950.5413142007816945No Hit
TGTGCCTGTCCGGACTACACGGGTTTCTAATCCTGTTTGCTACCCACGCT2910.5339743472117732No Hit
TGTGCCTGTCCGGACTACCAGGGTTTCTAATCCTGTTTGCTACCCACGCT2840.5211296034644108No Hit
TGTGCCTGTCCGGACTACGGGGGTATCTAATCCTGTTTGCTACCCACGCT2780.510119823109529No Hit
ATACACCACGTGTGCCAGCAGCCGCGGTAATACGGAGGATGCGAGCGTTA2770.5082848597170486No Hit
ATACACCACGTGTGCCAGCAGCCGCGGTAATACGTATGTCACAAGCGTTA2540.4660807016900013No Hit
TGTGCCTGTCCGGACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCT2480.45507092133511934No Hit
TGTGCCTGTCCGGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCT2460.4514009945501587No Hit
TGTGCCTGTCCGGACTACGCGGGTATCTAATCCTGTTTGCTACCCACGCT2450.44956603115767835No Hit
ATACACCACGTGTGCCAGCCGCCGCGGTAATACGGAAGGTCCAGGCGTTA2390.43855625080279653No Hit
TGTGCCTGTCCGGACTACCGGGGTATCTAATCCTGTTTGCTACCCACGCT2350.4312163972328752No Hit
ATACACCACGTGTGCCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTG2350.4312163972328752No Hit
TGTGCCTGTCCGGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCT2210.40552690973815075No Hit
TGTGCCTGTCCGGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCT2080.38167238563590655No Hit
TGTGCCTGTCCGGACTACTAGGGTTTCTAATCCTGTTTGCTACCCACGCT2040.37433253206598527No Hit
TGTGCCTGTCCGGACTACGAGGGTATCTAATCCTGTTTGCTACCCACGCT1890.3468080811787805No Hit
TGTGCCTGTCCGGACTACAAGGGTTTCTAATCCTGTTTGCTACCCACGCT1890.3468080811787805No Hit
ATACACCACGTGTGTCAGCCGCCGCGGTAATACGGAGGATGCGAGCGTTA1810.3321283740389379No Hit
TGTGCCTGTCCGGACTACCCGGGTATCTAATCCTGTTTGCTACCCACGCT1810.3321283740389379No Hit
ATACACCACGTGTGTCAGCAGCCGCGGTAATACGGAAGGTCCGGGCGTTA1710.3137787401141347No Hit
ATACACCACGTGTGTCAGCAGCCGCGGTAATACGTAGGGCGCGAGCGTTG1670.3064388865442135No Hit
ATACACCACGTGTGCCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTA1650.30276895975925283No Hit
ATACACCACGTGTGTCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTA1640.3009339963667725No Hit
TGTGCCTGTCCGGACTACTGGGGTATCTAATCCTGTTTGCTACCCACGCT1590.2917591794043709No Hit
ATACACCACGTGTGCCAGCCGCCGCGGTAATACGGAGGATGCGAGCGTTA1570.28808925261941026No Hit
ATACACCACGTGTGTCAGCCGCCGCGGTAATACGTATGTCACAAGCGTTA1550.2844193258344496No Hit
TGTGCCTGTCCGGACTACAGGGGTATCTAATCCTGTTTGCTACCCACGCT1480.2715745820870874No Hit
TGTGCCTGTCCGGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCT1470.26973961869460705No Hit
TGTGCCTGTCCGGACTACTCGGGTATCTAATCCTGTTTGCTACCCACGCT1450.2660696919096464No Hit
ATACACCACGTGTGTCAGCCGCCGCGGTAATACGTAGGGCGCGAGCGTTG1440.26423472851716606No Hit
ATACACCACGTGTGCCAGCAGCCGCGGTAATACGGAAGGTCCGGGCGTTA1380.2532249481622842No Hit
ATACACCACGTGTGTCAGCAGCCGCGGTAATACGGGGGGTGCGAGCGTTA1360.24955502137732352No Hit
ATACACCACGTGTGCCAGCCGCCGCGGTAATACGTATGTCACAAGCGTTA1290.2367102776299613No Hit
TGTGCCTGTCCGGACTACACGGGTATCTAATCCTGTTTGCTACCCACGCT1260.2312053874525203No Hit
TGTGCCTGTCCGGACTACCAGGGTATCTAATCCTGTTTGCTACCCACGCT1260.2312053874525203No Hit
ATACACCACGTGTGTCAGCAGCCGCGGTAATACGGAGGATACGAGCGTTA1210.2220305704901187No Hit
ATACACCACGTGTGTCAGCCGCCGCGGTAATACGGGGGGTGCGAGCGTTA1190.2183606437051581No Hit
ATACACCACGTGTGCCAGCAGCCGCGGTAATACGTAGGGCGCGAGCGTTG1170.21469071692019745No Hit
ATACACCACGTGTGTCAGCAGCCGCGGTAATACGTATGTCACGAGCGTTA1140.2091858267427565No Hit
TGTGCCTGTCCGGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCT1100.20184597317283523No Hit
TGTGCCTGTCCGGACTACCGGGGTTTCTAATCCTGTTCGATACCCGCACC1080.19817604638787456No Hit
TGTGCCTGTCCGGACTACGGGGGTTTCTAATCCTGTTCGATACCCGCACC1080.19817604638787456No Hit
ATACACCACGTGTGCCAGCAGCCGCGGTAATACGGGGGGTGCGAGCGTTA1060.19450611960291392No Hit
ATACACCACGTGTGCCAGCCGCCGCGGTAATACGTAGGGGGCAAGCGTTA1000.183496339248032No Hit
TGTGCCTGTCCGGACTACGCGGGTTTCTAATCCTGTTCGATACCCGCACC880.16147677853826817No Hit
ATACACCACGTGTGCCAGCAGCCGCGGTAATACGTATGTCACGAGCGTTA870.15964181514578785No Hit
ATACACCACGTGTGCCAGCCGCCGCGGTAATACGTAGGGCGCGAGCGTTG860.15780685175330753No Hit
ATACACCACGTGTGCCAGCAGCCGCGGTAATACGGAGGATACGAGCGTTA860.15780685175330753No Hit
ATACACCACGTGTGTCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA840.15413692496834688No Hit
ATACACCACGTGTGTCAGCCGCCGCGGTAATACGTAGGGGGCAAGCGTTA830.15230196157586656No Hit
TGTGCCTGTCCGGACTACCCGGGTTTCTAATCCTGTTCGATACCCGCACC820.15046699818338624No Hit
ATACACCACGTGTGTCAGCCGCCGCGGTAATACGGAAGGTCCGGGCGTTA820.15046699818338624No Hit
TGTGCCTGTCCGGACTACGCGGGTTTCTAATCCTGTTTGATACCCACGCT810.14863203479090592No Hit
ATACACCACGTGTGCCAGCCGCCGCGGTAATACGGAAGGTCCGGGCGTTA800.1467970713984256No Hit
TGTGCCTGTCCGGACTACGCGGGTTTCTAATCCCGTTCGCTCCCCTGGCT790.14496210800594528No Hit
TGTGCCTGTCCGGACTACTAGGGTATCTAATCCTGTTTGCTACCCACGCT780.14312714461346496No Hit
TGTGCCTGTCCGGACTACTCGGGTTTCTAATCCTGTTCGATACCCGCACC740.1357872910435437No Hit
ATACACCACGTGTGTCAGCCGCCGCGGTAATACGGAGGATACGAGCGTTA740.1357872910435437No Hit
TGTGCCTGTCCGGACTACCGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT740.1357872910435437No Hit
ATACACCACGTGTGTCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTA730.13395232765106335No Hit
TGTGCCTGTCCGGACTACGCGGGTTTCTAATCCTGTTTGATACCCGCACC730.13395232765106335No Hit
ATACACCACGTGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA730.13395232765106335No Hit
TGTGCCTGTCCGGACTACGAGGGTTTCTAATCCTGTTCGATACCCGCACC690.1266124740811421No Hit
TGTGCCTGTCCGGACTACCGGGGTTTCTAATCCTGTTTGATACCCACGCT660.12110758390370112No Hit
TGTGCCTGTCCGGACTACCCGGGTTTCTAATCCCGTTCGCTCCCCTGGCT660.12110758390370112No Hit
TGTGCCTGTCCGGACTACGGGGGTTTCTAATCCCGTTCGCTCCCCTGGCT650.11927262051122081No Hit
TGTGCCTGTCCGGACTACGGGGGTTTCTAATCCTGTTTGATACCCACGCT640.11743765711874049No Hit
TGTGCCTGTCCGGACTACCCGGGTTTCTAATCCTGTTTGATACCCACGCT630.11560269372626016No Hit
TGTGCCTGTCCGGACTACAAGGGTATCTAATCCTGTTTGCTACCCACGCT620.11376773033377983No Hit
ATACACCACGTGTGCCAGCCGCCGCGGTAATACGGAGGATACGAGCGTTA610.11193276694129951No Hit
ATACACCACGTGTGTCAGCAGCCGCGGTAATACGGAAGGTTCGGGCGTTA610.11193276694129951No Hit
TGTGCCTGTCCGGACTACCAGGGTTTCTAATCCTGTTCGATACCCGCACC610.11193276694129951No Hit
ATACACCACGTGTGTCAGCCGCCGCGGTAATACGTATGTCACGAGCGTTA600.1100978035488192No Hit
TGTGCCTGTCCGGACTACCGGGGTTTCTAATCCTGTTTGATACCCGCACC590.10826284015633889No Hit
TGTGCCTGTCCGGACTACGGGGGTTTCTAATCCTGTTTGATACCCGCACC580.10642787676385856No Hit
ATACACCACGTGTGCCAGCCGCCGCGGTAATACGGGGGGTGCGAGCGTTA570.10459291337137824No Hit
ATACACCACGTGTGCCAGCCGCCGCGGTAATACGTATGTCACGAGCGTTA570.10459291337137824No Hit
TGTGCCTGTCCGGACTACGAGGGTTTCTAATCCCGTTCGCTCCCCTGGCT570.10459291337137824No Hit
TGTGCCTGTCCGGACTACACGGGTTTCTAATCCTGTTCGATACCCGCACC560.10275794997889791No Hit
TGTGCCTGTCCGGACTACTGGGGTTTCTAATCCTGTTTGATACCCACGCT550.10092298658641762No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)