FastQCFastQC Report
Sat 25 May 2024
EGAF00007848532

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007848532
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences139850011
Total Bases10.4 Gbp
Sequences flagged as poor quality0
Sequence length75
%GC22

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTAGCTTATCTCGTATGC1930170.1380171503883543TruSeq Adapter, Index 10 (100% over 50bp)

[FAIL]Adapter Content

Adapter graph