FastQCFastQC Report
Fri 10 May 2024
EGAF00007848574

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007848574
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44242906
Total Bases3.3 Gbp
Sequences flagged as poor quality0
Sequence length75
%GC24

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGCCAATATCTCGTATGC10891072.4616534004344106TruSeq Adapter, Index 6 (100% over 50bp)

[OK]Adapter Content

Adapter graph