Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00007858027 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4642486 |
Total Bases | 468.8 Mbp |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 47 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
ATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTGTCAGTACGTGTAGATCTC | 28159 | 0.6065500251373941 | Illumina Single End Sequencing Primer (100% over 31bp) |
GTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGGCATCAATATGGTG | 9989 | 0.21516489225815652 | No Hit |
CCCAAACCCACTCCACCTTACTACCAGACAACCTTAGCCAAACCATTTAC | 8681 | 0.18699033233487403 | No Hit |
CCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCCCG | 7198 | 0.155046240311764 | No Hit |
CTCTAAATCCCCTTGTAAATTTAACTGTTAGTCCAAAGAGGAACAGCTCT | 4753 | 0.10238049183131624 | No Hit |