Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00007884019 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3085598 |
Total Bases | 311.6 Mbp |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
ATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTTCAGAGCCGTGTAGATCTC | 14662 | 0.47517531447712885 | Illumina Single End Sequencing Primer (100% over 31bp) |
CCAAACCCACTCCACCTTACTACCAGACAACCTTAGCCAAACCATTTACC | 5643 | 0.1828818919379647 | No Hit |
GGGTGTCCGCACTAAGTTCGGCATCAATATGGTGACCTCCCGGGAGCGGG | 3891 | 0.12610197439847964 | No Hit |
TGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGGCATC | 3459 | 0.11210144678600387 | No Hit |
GTGAACCGGCCCAGGTCGGAAACGGAGCAGGTCAAAACTCCCGTGCTGAT | 3328 | 0.10785591642203554 | No Hit |
CTCGATGTTGGATCAGGACATCCCGATGGTGCAGCCGCTATTAAAGGTTC | 3242 | 0.1050687743510334 | No Hit |