FastQCFastQC Report
Wed 8 May 2024
EGAF00007884103

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007884103
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2860928
Total Bases288.9 Mbp
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATT74790.2614186725426155No Hit
CCCAAACCCACTCCACCTTACTACCAGACAACCTTAACCAAACCATTTAC34330.11999602926043577No Hit
CATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATCTGGCTGGC30980.10828654198917274No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)