FastQCFastQC Report
Sun 19 Mar 2023
EGAF00007885628

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007885628
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences496285293
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCGGATGTACGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT22848770.4603958715335133No Hit
CCCGGATGTACTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA19121110.3852846390916525No Hit
CCCGGATGTACGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC6416690.1292943814879479No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)