FastQCFastQC Report
Sun 19 Mar 2023
EGAF00007885649

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007885649
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences502060190
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGGAAGAGCACACGTCTGAACTCCAGTCACTCTCGCGCATCTCGTATG68199741.3583976853452573TruSeq Adapter, Index 8 (97% over 35bp)
GGGTTTTACCAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT18323980.36497576117317726No Hit
GGGTTTTACCATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA11929220.23760537556263922No Hit
GGGTTTTACCAGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC5484230.10923451230020846No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)