FastQCFastQC Report
Wed 22 Feb 2023
EGAF00007890453

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007890453
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37589021
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCA749560.19940929028186183No Hit
AAGCCGCAGGCTCCACTCCTGGTGGT748250.1990607842646394No Hit
GCCAAATAAAAAAAAAAAAAAAAAAA501530.13342459757065767No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)