FastQCFastQC Report
Wed 22 Feb 2023
EGAF00007890475

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007890475
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44361800
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCA785050.17696531700697446No Hit
CCACCTACTAAGAACGGCCATGCACC733600.16536750086786378No Hit
AAGCCGCAGGCTCCACTCCTGGTGGT720840.16249115229769756No Hit
CGTTCGTTATCGGAATTAACCAGACA543600.12253785914908774No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)