FastQCFastQC Report
Wed 22 Feb 2023
EGAF00007890481

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007890481
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences97247924
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCA1773330.18235145050499998No Hit
CCACCTACTAAGAACGGCCATGCACC1641740.1688200562512779No Hit
AAGCCGCAGGCTCCACTCCTGGTGGT1584570.16294126751744334No Hit
CGTTCGTTATCGGAATTAACCAGACA1212350.12466590032297245No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)