FastQCFastQC Report
Wed 22 Feb 2023
EGAF00007890485

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007890485
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences81628496
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCA1478210.18108994682445206No Hit
CCACCTACTAAGAACGGCCATGCACC1388100.17005090967252415No Hit
AAGCCGCAGGCTCCACTCCTGGTGGT1347860.1651212586349747No Hit
CGTTCGTTATCGGAATTAACCAGACA1012640.12405471736242697No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)