FastQCFastQC Report
Sat 4 Feb 2023
EGAF00007890745

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007890745
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences145804783
Sequences flagged as poor quality0
Sequence length10
%GC30

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGTGGATAT14359014498.48109303794239No Hit
GTGTGGATAT10683590.7327324783302891No Hit
TTGTGGATAG4817520.33040891395174604No Hit
NTGTGGATAT1867920.12811102362807947No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)