FastQCFastQC Report
Sat 4 Feb 2023
EGAF00007890753

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007890753
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences145517818
Sequences flagged as poor quality0
Sequence length10
%GC30

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGTGGATAT14341904598.55772095208299No Hit
GTGTGGATAT9845190.6765625086544385No Hit
TTGTGGATAG4774870.32812957654436514No Hit
NTGTGGATAT1673060.11497286194876837No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)