FastQCFastQC Report
Sun 19 Mar 2023
EGAF00007896300

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007896300
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences480300582
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTGGGAAACTGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT30811510.6415047400463071No Hit
CCTGGGAAACTTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA20658640.4301189874469067No Hit
CCTGGGAAACTGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC7399620.15406227427806865No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACGAATTCGTATCTCGTATG5878500.12239210653298771TruSeq Adapter, Index 7 (97% over 34bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)