FastQCFastQC Report
Sun 19 Mar 2023
EGAF00007896316

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007896316
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences464101069
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TATTATGCTTCGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT29473580.6350681342645216No Hit
TATTATGCTTCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA21572010.46481276258383275No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACGAGATTCCATCTCGTATG15509690.3341877671908573TruSeq Adapter, Index 7 (97% over 37bp)
TATTATGCTTCGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC6756790.14558876183066927No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)