FastQCFastQC Report
Sun 19 Mar 2023
EGAF00007896318

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007896318
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences496936483
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGGAAGAGCACACGTCTGAACTCCAGTCACAGCTCGCTATCTCGTATG33397660.6720710018789262TruSeq Adapter, Index 14 (97% over 37bp)
GTAGTCGATATGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT22676420.45632431459052286No Hit
GTAGTCGATATTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA14164770.28504186117484154No Hit
GTAGTCGATATGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC6908910.13903004179308767No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)