FastQCFastQC Report
Sun 19 Mar 2023
EGAF00007896375

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007896375
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences508706641
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCCTGGCCTGGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT24405240.4797507646455121No Hit
ACCCTGGCCTGTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA20955910.41194488750541No Hit
ATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTGTGAATATGTGTAGATCTC17526870.34453786499712713Illumina Single End PCR Primer 1 (96% over 31bp)
ACCCTGGCCTGGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC8196760.16112940817692215No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)