FastQCFastQC Report
Sun 19 Mar 2023
EGAF00007896399

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007896399
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences472446669
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATTGTTAGGAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT24394490.5163437822862499No Hit
GATTGTTAGGATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA17574390.371986747989962No Hit
GATTGTTAGGAGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC7244770.15334577372160496No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)