FastQCFastQC Report
Wed 15 Mar 2023
EGAF00007899130

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007899130
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences124753434
Sequences flagged as poor quality0
Sequence length10
%GC69

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCCGAGGTG12311707898.68832789003628No Hit
CCCCGAGGTG2399140.1923105379207437No Hit
NCCCGAGGTG1905390.15273246907175317No Hit
ACCCGATGTG1355280.10863668891070366No Hit
AACCGAGGTG1327980.10644837239510377No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)