FastQCFastQC Report
Wed 15 Mar 2023
EGAF00007903123

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007903123
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74182706
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGAAAACCCCGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT3002170.4046994457171729No Hit
CAGAAAACCCCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA751730.1013349391703236No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)