FastQCFastQC Report
Wed 15 Mar 2023
EGAF00007903148

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007903148
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73660055
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTCCTGGGTAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT9982801.355252857196482No Hit
ACTCCTGGGTATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA5607480.7612647044588821No Hit
ACTCCTGGGTAGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC2437140.33086317950753635No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)