FastQCFastQC Report
Sun 19 Mar 2023
EGAF00007903155

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007903155
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences508553607
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCTCGGCTTGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT17886740.3517178868421633No Hit
GATCTCGGCTTTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA10224380.20104822499076286No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACATTACTCGATCTCGTATG10044090.19750307267017378TruSeq Adapter, Index 27 (97% over 38bp)
GATCTCGGCTTGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC5717310.1124229564259093No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)