FastQCFastQC Report
Sun 19 Mar 2023
EGAF00007903215

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007903215
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences457443283
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGGAAGAGCACACGTCTGAACTCCAGTCACCGGCTATGATCTCGTATG57884881.2654001523506904TruSeq Adapter, Index 7 (97% over 35bp)
GCCACGCGTTAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT9013730.19704584885116785No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)