FastQCFastQC Report
Sun 19 Mar 2023
EGAF00007903231

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007903231
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences502904486
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGGAAGAGCACACGTCTGAACTCCAGTCACGAGATTCCATCTCGTATG78940611.569693892132034TruSeq Adapter, Index 7 (97% over 37bp)
CCTGGGAAACTGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT24793300.4930021642320367No Hit
CCTGGGAAACTTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA14585920.2900336029215695No Hit
CCTGGGAAACTGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC7519250.14951646305258848No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)